PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn015171
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family bZIP
Protein Properties Length: 186aa    MW: 21554.2 Da    PI: 8.2167
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn015171genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.74.4e-1260115560
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
                 ++ +r+q+NRe+ArrsR RK++ +  L   v++L++eN +   + +  ++++ + +
  Achn015171  60 RKRKRMQSNRESARRSRMRKQKHLNDLMAQVAQLSKENNQILMRTSITTQHYLNIE 115
                 6789**********************************998777666666666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.6E-1055100No hitNo description
SMARTSM003389.9E-1756120IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.5358121IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.63E-1160112No hitNo description
PfamPF001701.9E-960103IPR004827Basic-leucine zipper domain
CDDcd147027.41E-1861111No hitNo description
PROSITE patternPS0003606378IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009845Biological Processseed germination
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    Send to blast
MNSKCYVLEK HTESTITFTQ IINLFWCKYI MGSSSGNSSG STQLQNSGSE EDLQLAMDQR  60
KRKRMQSNRE SARRSRMRKQ KHLNDLMAQV AQLSKENNQI LMRTSITTQH YLNIEAENSV  120
LRAQMGELSQ RLQSLNDILD YMNTGNTVFE ADQNVQIYQD SFMNNSWNWM HFNQPIMASA  180
DVFQY*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15980RKRKRMQSNRESARRSRMRKQK
27279RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00239DAPTransfer from AT1G75390Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002306888.14e-69bZIP transcription factor 44
SwissprotC0Z2L51e-48BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A2R6Q0D71e-109A0A2R6Q0D7_ACTCH; BZIP transcription factor
STRINGPOPTR_0005s25290.11e-68(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53724123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.12e-45basic leucine-zipper 44
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]