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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Achn014701 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
|
| Family |
Dof |
| Protein Properties |
Length: 225aa MW: 23531.1 Da PI: 7.3907 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Achn014701 | genome | IKGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 121.3 | 3.5e-38 | 23 | 81 | 3 | 61 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
++l+cprC+stntkfCyynny+lsqPr+fCk+CrryWt+GG+lrnvPvGgg+r+++ +
Achn014701 23 PEQLPCPRCESTNTKFCYYNNYNLSQPRHFCKSCRRYWTRGGTLRNVPVGGGTRNKNPN 81
6789**************************************************88754 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009733 | Biological Process | response to auxin |
| GO:0009751 | Biological Process | response to salicylic acid |
| GO:0042545 | Biological Process | cell wall modification |
| GO:0045787 | Biological Process | positive regulation of cell cycle |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 225 aa
Download sequence Send
to blast |
MPPETSDRRP ARMQNDGAHP PEPEQLPCPR CESTNTKFCY YNNYNLSQPR HFCKSCRRYW 60
TRGGTLRNVP VGGGTRNKNP NKRSRTAAAT SSSSSSSLPD PEPSNPIAMI PGIKIHNTAL 120
PLYADVDLNA NVPEAESYAS FMNPHGGSLF ALGGFGSGFG FGVGAGIWHM EDVSGGNGGG 180
GVGVSGADPG CNTWQVGSGE GGLADVDCFG WPDLAISTPG KGLK*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP002537 | 9e-49 | AP002537.2 Oryza sativa Japonica Group genomic DNA, chromosome 1, PAC clone:P0001B06. |
| GenBank | AP002746 | 9e-49 | AP002746.2 Oryza sativa Japonica Group genomic DNA, chromosome 1, PAC clone:P0671B11. |
| GenBank | AP014957 | 9e-49 | AP014957.1 Oryza sativa Japonica Group DNA, chromosome 1, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012609 | 9e-49 | CP012609.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 1 sequence. |
| GenBank | GQ183547 | 9e-49 | GQ183547.1 Oryza sativa Japonica Group Dof-type zinc finger protein 18 gene, partial cds. |
