PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn010691
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family WRKY
Protein Properties Length: 374aa    MW: 41406.8 Da    PI: 4.7531
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn010691genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY75.75.5e-24209265259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                  DgynWrKYGqK+vk+ + +rsYYrCt+++C++kk +e++++ ++v++++ +g+Hnh+
  Achn010691 209 TDGYNWRKYGQKQVKSPQGSRSYYRCTYSDCHAKK-IECCDHSNHVIDVISKGQHNHD 265
                 6********************************98.*********************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.9E-20205267IPR003657WRKY domain
SuperFamilySSF1182901.7E-19207267IPR003657WRKY domain
SMARTSM007745.5E-21208266IPR003657WRKY domain
PROSITE profilePS5081117.58209267IPR003657WRKY domain
PfamPF031061.4E-16210265IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
MDESKQRIEA LEEEAENMMD DGEGGEDEES DEIDDDDDGE GEVGEEKRRQ VRVLAPIEAK  60
LLGSKSETLA SNSSSLQFSE SDLSSYFATS SHLLSEVPVD YALLRPLESP NFKDQVGKSH  120
QQALASVMTE AAQAQLQNQV QSPGYPTSSE LSPTSVTQSI SSGPSPMLLD QKMSPLASTN  180
TAFISKVEKQ NSSNRKNISV MPVVKIPSTD GYNWRKYGQK QVKSPQGSRS YYRCTYSDCH  240
AKKIECCDHS NHVIDVISKG QHNHDPPRRI NCTRESRLAL PAVPDTTARS VRMLNDSDPS  300
TSSRELIQET PVLPETKRQN SSGSDGTAEI GIKEEHVDEP ESKRRQVTLY SFLKFWFLLD  360
IFFLFGRCSV IGS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028113356.11e-142probable WRKY transcription factor 32
TrEMBLA0A2R6QHL70.0A0A2R6QHL7_ACTCH; WRKY transcription factor
STRINGVIT_11s0037g00150.t019e-94(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA91892127
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.19e-38WRKY DNA-binding protein 32