PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn009641 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | bHLH | ||||||||
Protein Properties | Length: 472aa MW: 52234.3 Da PI: 5.6661 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 43.8 | 4.7e-14 | 269 | 315 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h + Er+RR+++N +f Lr+l+P++ +K + a+i A+eYIk+L Achn009641 269 TKHFATERQRREHLNGKFTALRSLVPNP-----TKTDRASIIGDAIEYIKEL 315 68**************************.....9****************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 16.094 | 266 | 315 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 8.51E-17 | 267 | 332 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.3E-11 | 269 | 315 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.71E-13 | 269 | 319 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 9.2E-15 | 269 | 323 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 5.9E-13 | 272 | 321 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 472 aa Download sequence Send to blast |
MYEESECFDP NSMQGLSKDG FSQNPSFSME EPSYHQNPSP ESAAGGGAAA TVEVELHQQM 60 GLDMANMEPC YNINNSNSLI DSTYLMQEVV LDSNHVLPYD HSNWDPNLNH NHHQDLNHHV 120 EIANGHYPNL ISNNSSIPDL LNLLHLPTCS PSSVLPNSSL SFLSQAQKST NFPPSFLGDF 180 ASNESGMVSN LVHDSLFHLN LPSRPPLLRE MFQSLPNCSL FGGGGSGGVV DEKDGSEGGR 240 QFDNGVLQFC REWDMNCMAK EGNGKGITTK HFATERQRRE HLNGKFTALR SLVPNPTKTD 300 RASIIGDAIE YIKELLRTVN ELKILVEKKR CGKDRSKRHK TEEDGTTGDL ENVNKKPDPD 360 QSYNGPSLRS SWLQRKSKDT EVDVRIIDDE VTIKLAQRKK INCLLIVSKV IDELQLDIHH 420 VTGGLVGDNY SFLFNSKICE GSSVYASAIA NKLIEVVNRQ YAAIPPSTSS Y* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028113214.1 | 0.0 | transcription factor bHLH91-like | ||||
Refseq | XP_028113215.1 | 0.0 | transcription factor bHLH91-like | ||||
TrEMBL | A0A2R6RAH9 | 0.0 | A0A2R6RAH9_ACTCH; Transcription factor bHLH91 like | ||||
STRING | VIT_15s0107g00380.t01 | 1e-154 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2696 | 23 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31210.1 | 6e-91 | bHLH family protein |