PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Achn009641

Organism

Actinidia chinensis

Taxonomic ID

3625

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia

Family

bHLH

Protein Properties

Length: 472aa MW: 52234.3 Da PI: 5.6661

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Achn009641	genome	IKGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.8	4.7e-14	269	315	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h + Er+RR+++N +f Lr+l+P++ +K + a+i A+eYIk+L Achn009641 269 TKHFATERQRREHLNGKFTALRSLVPNP-----TKTDRASIIGDAIEYIKEL 315 68************************.....9**************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	16.094	266	315	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	8.51E-17	267	332	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	1.3E-11	269	315	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	1.71E-13	269	319	No hit	No description
Gene3D	G3DSA:4.10.280.10	9.2E-15	269	323	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	5.9E-13	272	321	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 472 aa Download sequence Send to blast
MYEESECFDP NSMQGLSKDG FSQNPSFSME EPSYHQNPSP ESAAGGGAAA TVEVELHQQM 60 GLDMANMEPC YNINNSNSLI DSTYLMQEVV LDSNHVLPYD HSNWDPNLNH NHHQDLNHHV 120 EIANGHYPNL ISNNSSIPDL LNLLHLPTCS PSSVLPNSSL SFLSQAQKST NFPPSFLGDF 180 ASNESGMVSN LVHDSLFHLN LPSRPPLLRE MFQSLPNCSL FGGGGSGGVV DEKDGSEGGR 240 QFDNGVLQFC REWDMNCMAK EGNGKGITTK HFATERQRRE HLNGKFTALR SLVPNPTKTD 300 RASIIGDAIE YIKELLRTVN ELKILVEKKR CGKDRSKRHK TEEDGTTGDL ENVNKKPDPD 360 QSYNGPSLRS SWLQRKSKDT EVDVRIIDDE VTIKLAQRKK INCLLIVSKV IDELQLDIHH 420 VTGGLVGDNY SFLFNSKICE GSSVYASAIA NKLIEVVNRQ YAAIPPSTSS Y*

Sequence ? help Back to Top

Protein Sequence Length: 472 aa Download sequence Send to blast

MYEESECFDP NSMQGLSKDG FSQNPSFSME EPSYHQNPSP ESAAGGGAAA TVEVELHQQM  60
GLDMANMEPC YNINNSNSLI DSTYLMQEVV LDSNHVLPYD HSNWDPNLNH NHHQDLNHHV  120
EIANGHYPNL ISNNSSIPDL LNLLHLPTCS PSSVLPNSSL SFLSQAQKST NFPPSFLGDF  180
ASNESGMVSN LVHDSLFHLN LPSRPPLLRE MFQSLPNCSL FGGGGSGGVV DEKDGSEGGR  240
QFDNGVLQFC REWDMNCMAK EGNGKGITTK HFATERQRRE HLNGKFTALR SLVPNPTKTD  300
RASIIGDAIE YIKELLRTVN ELKILVEKKR CGKDRSKRHK TEEDGTTGDL ENVNKKPDPD  360
QSYNGPSLRS SWLQRKSKDT EVDVRIIDDE VTIKLAQRKK INCLLIVSKV IDELQLDIHH  420
VTGGLVGDNY SFLFNSKICE GSSVYASAIA NKLIEVVNRQ YAAIPPSTSS Y*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028113214.1	0.0	transcription factor bHLH91-like
Refseq	XP_028113215.1	0.0	transcription factor bHLH91-like
TrEMBL	A0A2R6RAH9	0.0	A0A2R6RAH9_ACTCH; Transcription factor bHLH91 like
STRING	VIT_15s0107g00380.t01	1e-154	(Vitis vinifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2696	23	51

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31210.1	6e-91	bHLH family protein