PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn009481 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | NAC | ||||||||
Protein Properties | Length: 335aa MW: 37340.6 Da PI: 4.3704 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 62.8 | 1.1e-19 | 6 | 142 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykveP.wdLpk..........kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 G++F+Ptd+el+++yL kk+ g+ l++e +i e d+y+ + +++ v +++++ yfF++ +kk+a+g+ r++ +g+W+++ + Achn009481 6 REGLKFRPTDQELINDYLFKKIVGEGLPFEGIILERDVYDQHVlSEI-FrswvdededgDV-SRDTQSYFFTRLKKKTANGETYCRTVGNGTWRSQYS- 101 57***************************999*******99862334.1356666554322.367799**************************8876. PP NAM 90 kevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128 + + + ++ +g+k++L + ++ + ++ +W++ e++l Achn009481 102 RVINADeyddESIPIGIKRSLEYI--DSGSVQHKNWTIMEFSL 142 55554456557777**********..45555689*******97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 25.214 | 5 | 164 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 3.4E-20 | 5 | 163 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.3E-13 | 7 | 142 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 335 aa Download sequence Send to blast |
MAKRLREGLK FRPTDQELIN DYLFKKIVGE GLPFEGIILE RDVYDQHVLS EIFRSWVDED 60 EDGDVSRDTQ SYFFTRLKKK TANGETYCRT VGNGTWRSQY SRVINADEYD DESIPIGIKR 120 SLEYIDSGSV QHKNWTIMEF SLAGISLEHP LSSKDYVICR LQKSRGGKHG DEAPVNTPSG 180 CFNNKRIKLS SKQNQQMENQ QTESAPLVDE QVGLINGEAG VETLEQIMQY LLEPDSSMVN 240 VENLVATNTL ATLPPSASYD LSECTSMPPL VEDKPAATVD EEGGCTSRKQ ESIAAPKSLA 300 DDAVMDSIIL LSTTVEGFAE DFIEHFANQF LNGN* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2R6S1Y4 | 1e-176 | A0A2R6S1Y4_ACTCH; Phosphate transporter like |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04410.1 | 4e-14 | NAC domain containing protein 2 |