PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn009481
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 335aa    MW: 37340.6 Da    PI: 4.3704
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn009481genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM62.81.1e-1961422128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykveP.wdLpk..........kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                   G++F+Ptd+el+++yL kk+ g+ l++e +i e d+y+ +  +++             v +++++ yfF++ +kk+a+g+   r++ +g+W+++ + 
  Achn009481   6 REGLKFRPTDQELINDYLFKKIVGEGLPFEGIILERDVYDQHVlSEI-FrswvdededgDV-SRDTQSYFFTRLKKKTANGETYCRTVGNGTWRSQYS- 101
                 57***************************999*******99862334.1356666554322.367799**************************8876. PP

         NAM  90 kevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                 + + +     ++  +g+k++L +   ++ + ++ +W++ e++l
  Achn009481 102 RVINADeyddESIPIGIKRSLEYI--DSGSVQHKNWTIMEFSL 142
                 55554456557777**********..45555689*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100525.2145164IPR003441NAC domain
SuperFamilySSF1019413.4E-205163IPR003441NAC domain
PfamPF023656.3E-137142IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MAKRLREGLK FRPTDQELIN DYLFKKIVGE GLPFEGIILE RDVYDQHVLS EIFRSWVDED  60
EDGDVSRDTQ SYFFTRLKKK TANGETYCRT VGNGTWRSQY SRVINADEYD DESIPIGIKR  120
SLEYIDSGSV QHKNWTIMEF SLAGISLEHP LSSKDYVICR LQKSRGGKHG DEAPVNTPSG  180
CFNNKRIKLS SKQNQQMENQ QTESAPLVDE QVGLINGEAG VETLEQIMQY LLEPDSSMVN  240
VENLVATNTL ATLPPSASYD LSECTSMPPL VEDKPAATVD EEGGCTSRKQ ESIAAPKSLA  300
DDAVMDSIIL LSTTVEGFAE DFIEHFANQF LNGN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6S1Y41e-176A0A2R6S1Y4_ACTCH; Phosphate transporter like
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.14e-14NAC domain containing protein 2