PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn009461
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 345aa    MW: 38805.5 Da    PI: 4.4677
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn009461genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM63.75.5e-2061422128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykveP.wdLpk..........kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                   G++F+Ptd+el+++yL kk+ g+ l++e +i e d+y+ +  +++             v +++++ yfF++ +kk+a+g+   r++ +g+W+++ + 
  Achn009461   6 REGLKFRPTDQELINDYLFKKIVGEGLPFEGIILERDVYDQHVlSEI-FrswvdededgDV-SRDTQSYFFTRLKKKTANGETYCRTVGNGTWRSQYS- 101
                 57***************************999*******99862334.1356666554322.367799**************************8876. PP

         NAM  90 kevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                 + + +     ++  +g+k++L +   ++ + ++ +W++ e++l
  Achn009461 102 RVINADeyddESIPIGVKRSLEYI--DSGSVQHKNWIIMEFSL 142
                 55554456557777**********..45555689*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100525.5745164IPR003441NAC domain
SuperFamilySSF1019411.31E-205163IPR003441NAC domain
PfamPF023652.2E-137142IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    Send to blast
MAKRLREGLK FRPTDQELIN DYLFKKIVGE GLPFEGIILE RDVYDQHVLS EIFRSWVDED  60
EDGDVSRDTQ SYFFTRLKKK TANGETYCRT VGNGTWRSQY SRVINADEYD DESIPIGVKR  120
SLEYIDSGSV QHKNWIIMEF SLAGVSLKHP LSSKDYVICR LQKSRGGKHG DETLVNTPSG  180
CFNNKRNKLS SKQNQQTELA SLVDEQVGLI NREAGVETLE QIMQYLLEPD SSMVNMENVV  240
ATNTLATLPP SASYDLSECT SMPPLVEDKP ASTVDEEGGC TSRKQEIRML PVEKSHWEYQ  300
PSIAAPESLV DDAVMDSIIL LSTTVEGFAE DFIENFADQF LKGN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6QCA21e-170A0A2R6QCA2_ACTCH; NAC domain-containing protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.18e-15NAC domain containing protein 32