PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn008571 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | NAC | ||||||||
Protein Properties | Length: 376aa MW: 42261.1 Da PI: 4.2504 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 64.1 | 4.3e-20 | 6 | 142 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykveP.wdLpk..........kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 G++F+Ptd+el+++yL +k+ gk+l++e +i e diy+ + +++ v +++++ yfF++ +kk+++g+ r++ +g+W+++ + Achn008571 6 REGLKFRPTDQELINDYLFNKIVGKELPFEGIILERDIYDQHVlSEI-FrswvdededgDV-SRDTQSYFFTRLKKKTSNGETYCRTVGNGTWRSQYS- 101 57***************************999*******99862334.1356666554322.367799**************************8876. PP NAM 90 kevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128 + + + ++ +g+k++L + ++ + ++ +W++ e++l Achn008571 102 RVINADeyddESIPIGVKRSLEYI--DSGSVQHKNWTIMEFSL 142 55554456557777**********..45555689*******97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.88E-20 | 5 | 163 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 25.322 | 5 | 164 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.8E-13 | 7 | 142 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 376 aa Download sequence Send to blast |
MAKRLREGLK FRPTDQELIN DYLFNKIVGK ELPFEGIILE RDIYDQHVLS EIFRSWVDED 60 EDGDVSRDTQ SYFFTRLKKK TSNGETYCRT VGNGTWRSQY SRVINADEYD DESIPIGVKR 120 SLEYIDSGSV QHKNWTIMEF SLAGVSLEHP LSSKDYVICR LQKSRGWKHG DDAPMNTPSG 180 CFNNKRIKLP SKQNQQTEST PLVDEQVGLI NEEAGVQTLE QIMQYLLEPD SSMVDADVEN 240 VERIMQYLLE SDSPLDSMPP LMEAKPAPTV DEDSGHLSGE NEVRIRPSIN DQSLPSSNPE 300 YEVLDYIHSL ASAPEVTAIE NDVGILEQPS IPPPESLPAD SHGHAILNFV IPLAMPAPTV 360 EPSWVESFSE DLLSV* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2R6QCA2 | 0.0 | A0A2R6QCA2_ACTCH; NAC domain-containing protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04410.1 | 6e-14 | NAC domain containing protein 2 |