PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn008571
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 376aa    MW: 42261.1 Da    PI: 4.2504
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn008571genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM64.14.3e-2061422128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykveP.wdLpk..........kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                   G++F+Ptd+el+++yL +k+ gk+l++e +i e diy+ +  +++             v +++++ yfF++ +kk+++g+   r++ +g+W+++ + 
  Achn008571   6 REGLKFRPTDQELINDYLFNKIVGKELPFEGIILERDIYDQHVlSEI-FrswvdededgDV-SRDTQSYFFTRLKKKTSNGETYCRTVGNGTWRSQYS- 101
                 57***************************999*******99862334.1356666554322.367799**************************8876. PP

         NAM  90 kevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                 + + +     ++  +g+k++L +   ++ + ++ +W++ e++l
  Achn008571 102 RVINADeyddESIPIGVKRSLEYI--DSGSVQHKNWTIMEFSL 142
                 55554456557777**********..45555689*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.88E-205163IPR003441NAC domain
PROSITE profilePS5100525.3225164IPR003441NAC domain
PfamPF023654.8E-137142IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    Send to blast
MAKRLREGLK FRPTDQELIN DYLFNKIVGK ELPFEGIILE RDIYDQHVLS EIFRSWVDED  60
EDGDVSRDTQ SYFFTRLKKK TSNGETYCRT VGNGTWRSQY SRVINADEYD DESIPIGVKR  120
SLEYIDSGSV QHKNWTIMEF SLAGVSLEHP LSSKDYVICR LQKSRGWKHG DDAPMNTPSG  180
CFNNKRIKLP SKQNQQTEST PLVDEQVGLI NEEAGVQTLE QIMQYLLEPD SSMVDADVEN  240
VERIMQYLLE SDSPLDSMPP LMEAKPAPTV DEDSGHLSGE NEVRIRPSIN DQSLPSSNPE  300
YEVLDYIHSL ASAPEVTAIE NDVGILEQPS IPPPESLPAD SHGHAILNFV IPLAMPAPTV  360
EPSWVESFSE DLLSV*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6QCA20.0A0A2R6QCA2_ACTCH; NAC domain-containing protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.16e-14NAC domain containing protein 2