PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn008561
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 440aa    MW: 49261.2 Da    PI: 4.4047
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn008561genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM64.92.4e-20662022128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykveP.wdLpk..........kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                   G++F+Ptd+el+++yL +k+ gk+l++e +i e d+y+ +  +++            +  +++++ yfF++ +kk+a+g+   r++ +g+W++  + 
  Achn008561  66 LEGLKFRPTDQELINDYLFNKIIGKELPFEGIILERDVYDQHVlSEI-FrswvdededgN-VSRDTQSYFFTRLKKKTANGETYCRTVGNGTWRSRYS- 161
                 68***************************999*******99862334.135666665532.2367799*************************97755. PP

         NAM  90 kevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                 + + +     k+  +g+k++L +   ++ + ++ +W++ e++l
  Achn008561 162 RVINADeyndKSIPIGMKRSLEYI--DSGSIQHKNWIIMEFSL 202
                 55544455546777**********..55666789*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.79E-2162223IPR003441NAC domain
PROSITE profilePS5100525.62865224IPR003441NAC domain
PfamPF023651.8E-1368202IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    Send to blast
MVNVENVVAT NTLATLPPSA SYDLSECTSM PPLVEDKATA TVDEEAIHFE ENRQRKLVRS  60
MAKRLLEGLK FRPTDQELIN DYLFNKIIGK ELPFEGIILE RDVYDQHVLS EIFRSWVDED  120
EDGNVSRDTQ SYFFTRLKKK TANGETYCRT VGNGTWRSRY SRVINADEYN DKSIPIGMKR  180
SLEYIDSGSI QHKNWIIMEF SLAGISLEHP LSSKDYVICR LQKSRGGKHG DETYVNTPSG  240
FFNNKRIKLP SKQNQQMENQ QTESTPLIDE QVGLINREAG VETIEQIMQY LLEPDSSMVD  300
VENVVATVTL ATPLPSGHYD ILDSTLQLDS MPPLMEAKPA PKVDEDSGYP SRENEIRMQP  360
SIPDQSLPSS NLEYTVLDYI HSLASAPEVT AIENDVGMLE QQSIPPPESL PADSPGHTIL  420
NSVIPSATPA PTVELSYEV*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6S1Y40.0A0A2R6S1Y4_ACTCH; Phosphate transporter like
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.18e-16NAC domain containing protein 2