PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn008561 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | NAC | ||||||||
Protein Properties | Length: 440aa MW: 49261.2 Da PI: 4.4047 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 64.9 | 2.4e-20 | 66 | 202 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykveP.wdLpk..........kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 G++F+Ptd+el+++yL +k+ gk+l++e +i e d+y+ + +++ + +++++ yfF++ +kk+a+g+ r++ +g+W++ + Achn008561 66 LEGLKFRPTDQELINDYLFNKIIGKELPFEGIILERDVYDQHVlSEI-FrswvdededgN-VSRDTQSYFFTRLKKKTANGETYCRTVGNGTWRSRYS- 161 68***************************999*******99862334.135666665532.2367799*************************97755. PP NAM 90 kevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128 + + + k+ +g+k++L + ++ + ++ +W++ e++l Achn008561 162 RVINADeyndKSIPIGMKRSLEYI--DSGSIQHKNWIIMEFSL 202 55544455546777**********..55666789*******97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.79E-21 | 62 | 223 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 25.628 | 65 | 224 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.8E-13 | 68 | 202 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 440 aa Download sequence Send to blast |
MVNVENVVAT NTLATLPPSA SYDLSECTSM PPLVEDKATA TVDEEAIHFE ENRQRKLVRS 60 MAKRLLEGLK FRPTDQELIN DYLFNKIIGK ELPFEGIILE RDVYDQHVLS EIFRSWVDED 120 EDGNVSRDTQ SYFFTRLKKK TANGETYCRT VGNGTWRSRY SRVINADEYN DKSIPIGMKR 180 SLEYIDSGSI QHKNWIIMEF SLAGISLEHP LSSKDYVICR LQKSRGGKHG DETYVNTPSG 240 FFNNKRIKLP SKQNQQMENQ QTESTPLIDE QVGLINREAG VETIEQIMQY LLEPDSSMVD 300 VENVVATVTL ATPLPSGHYD ILDSTLQLDS MPPLMEAKPA PKVDEDSGYP SRENEIRMQP 360 SIPDQSLPSS NLEYTVLDYI HSLASAPEVT AIENDVGMLE QQSIPPPESL PADSPGHTIL 420 NSVIPSATPA PTVELSYEV* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2R6S1Y4 | 0.0 | A0A2R6S1Y4_ACTCH; Phosphate transporter like |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04410.1 | 8e-16 | NAC domain containing protein 2 |