PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn008531 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | NAC | ||||||||
Protein Properties | Length: 322aa MW: 36029.1 Da PI: 4.2114 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 32.5 | 2.6e-10 | 38 | 113 | 54 | 128 |
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++ yfF++ +kk+a+g+ r++ +g+W+++ + + v + ++ +g+k++L + ++ + ++ +W++ e++l Achn008531 38 RDTQSYFFTRLKKKTANGETYCRTVGNGTWRSQYS-RVVNADeyddESIPIGVKRSLEYI--DSGSVQHKNWIIMEFSL 113 57799**************************8876.44444346556777**********..45555689*******97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 16.338 | 1 | 135 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.1E-5 | 25 | 113 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 3.01E-10 | 37 | 134 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence Send to blast |
MELPFEGIIL ERDIYDQHVL SEIFRSWVDE DEDGDVSRDT QSYFFTRLKK KTANGETYCR 60 TVGNGTWRSQ YSRVVNADEY DDESIPIGVK RSLEYIDSGS VQHKNWIIME FSLAGVSLEH 120 PLSSKDYVIC RLQKSRGGKH GDEAPVNTPS GCFNNKRIKL SSKQNQQMEN QQTESAPLVD 180 EKVGLINGEA CVETLEQIMQ YLLEPDLSML NVENVVATNT LATLPPSASY DLSECTSMPP 240 LVEDKPAATV DEEGGCISRK QESRMLPVEK SHWEYRPSIA ALESLADDAV MDSIILLSTT 300 VEGFAEDFIE DFVDQFLNGN S* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2R6S1Y4 | 1e-152 | A0A2R6S1Y4_ACTCH; Phosphate transporter like |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-08 | NAC family protein |