PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn008531
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 322aa    MW: 36029.1 Da    PI: 4.2114
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn008531genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM32.52.6e-103811354128
         NAM  54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                 ++++ yfF++ +kk+a+g+   r++ +g+W+++ + + v +     ++  +g+k++L +   ++ + ++ +W++ e++l
  Achn008531  38 RDTQSYFFTRLKKKTANGETYCRTVGNGTWRSQYS-RVVNADeyddESIPIGVKRSLEYI--DSGSVQHKNWIIMEFSL 113
                 57799**************************8876.44444346556777**********..45555689*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100516.3381135IPR003441NAC domain
PfamPF023652.1E-525113IPR003441NAC domain
SuperFamilySSF1019413.01E-1037134IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MELPFEGIIL ERDIYDQHVL SEIFRSWVDE DEDGDVSRDT QSYFFTRLKK KTANGETYCR  60
TVGNGTWRSQ YSRVVNADEY DDESIPIGVK RSLEYIDSGS VQHKNWIIME FSLAGVSLEH  120
PLSSKDYVIC RLQKSRGGKH GDEAPVNTPS GCFNNKRIKL SSKQNQQMEN QQTESAPLVD  180
EKVGLINGEA CVETLEQIMQ YLLEPDLSML NVENVVATNT LATLPPSASY DLSECTSMPP  240
LVEDKPAATV DEEGGCISRK QESRMLPVEK SHWEYRPSIA ALESLADDAV MDSIILLSTT  300
VEGFAEDFIE DFVDQFLNGN S*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6S1Y41e-152A0A2R6S1Y4_ACTCH; Phosphate transporter like
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.11e-08NAC family protein