PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn006801
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family bZIP
Protein Properties Length: 148aa    MW: 16561.8 Da    PI: 8.7062
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn006801genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.65.5e-132785563
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                ++ +r+++NRe+ArrsR +K+++++ L+   + + +e  +  + ++ +++++ +++se+
  Achn006801 27 RKRKRMISNRESARRSRMKKQKQLDDLTAQLAHFRSEKNQIVSGINVITQLCLNMESEN 85
                6789****************************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.0E-122087IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.1E-825106No hitNo description
PROSITE profilePS502179.0252576IPR004827Basic-leucine zipper domain
PfamPF001702.2E-92785IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.29E-102779No hitNo description
CDDcd147025.26E-162878No hitNo description
PROSITE patternPS0003603045IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    Send to blast
MGSLSGTSSG SSLLQNSGSE KDLLQQRKRK RMISNRESAR RSRMKKQKQL DDLTAQLAHF  60
RSEKNQIVSG INVITQLCLN MESENLILSA QVAELSNRLE SLNEIISFMN CGNGWFGPEI  120
ADGYMSNSLS YMYLNPPIMS SAEMWQY*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12647RKRKRMISNRESARRSRMKKQK
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004289640.11e-50PREDICTED: ocs element-binding factor 1
RefseqXP_012067226.18e-51bZIP transcription factor 11 isoform X1
SwissprotC0Z2L54e-41BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A2R6RBT71e-103A0A2R6RBT7_ACTCH; BZIP transcription factor
STRINGXP_004289640.14e-50(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53724123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.12e-41basic leucine-zipper 44
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]