PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn004191 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | NAC | ||||||||
Protein Properties | Length: 361aa MW: 40015.4 Da PI: 5.0576 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 67 | 5.5e-21 | 6 | 127 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 p+Gf F+Ptd+e++++yL kk g++l+l+ vi+e d+++ e L + ++++e+++yfF++ +kk+ +g+++ r++ +++W+ +++++++++++ Achn004191 6 PVGFLFRPTDKEIIKHYLLKKQMGEELPLNGVIQEGDVFSEE--VLSEVFRSSETHVYFFTQLKKKSVKGSNHDRTVGKATWRCESV-TDICVNEKTVI 101 89***************************99*******9986..67767888999****************************8876.5666669999* PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 g k++L + + + + dW m+e++l Achn004191 102 GKKRILDYT--NPGSIGHRDWNMKEFSL 127 *******98..45555589*******98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 5.1E-22 | 3 | 148 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 23.792 | 5 | 149 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.5E-13 | 6 | 127 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 361 aa Download sequence Send to blast |
MAVTFPVGFL FRPTDKEIIK HYLLKKQMGE ELPLNGVIQE GDVFSEEVLS EVFRSSETHV 60 YFFTQLKKKS VKGSNHDRTV GKATWRCESV TDICVNEKTV IGKKRILDYT NPGSIGHRDW 120 NMKEFSLDGV LLEHPQTSSD YVVCLLEKKE RAITRDRQKN RQSKRNAGGA LVNLPSDCDL 180 LINKRMRVCG ENNQRMEQYL MNSTATTFPH GLHENEVVTN TLASPAYALP VTVIESAPIA 240 QQVAAGVESM VNVVATDTLA KLPPSASYDL SECISMPPLV PAQTVDEEGG CTSGEQENRM 300 LPMEKSHWEY QPSIAAPESL AVDAIRDSII LLSATVEGFA EDFIYPFLNG NEVVDNKLSS 360 * |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2R6QAS5 | 0.0 | A0A2R6QAS5_ACTCH; NAC domain-containing protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G09330.4 | 3e-13 | NAC domain containing protein 82 |