PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn004191
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 361aa    MW: 40015.4 Da    PI: 5.0576
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn004191genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM675.5e-2161272128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100
                 p+Gf F+Ptd+e++++yL kk  g++l+l+ vi+e d+++ e   L + ++++e+++yfF++ +kk+ +g+++ r++ +++W+     +++++++++++
  Achn004191   6 PVGFLFRPTDKEIIKHYLLKKQMGEELPLNGVIQEGDVFSEE--VLSEVFRSSETHVYFFTQLKKKSVKGSNHDRTVGKATWRCESV-TDICVNEKTVI 101
                 89***************************99*******9986..67767888999****************************8876.5666669999* PP

         NAM 101 glkktLvfykgrapkgektdWvmheyrl 128
                 g k++L +   +  +  + dW m+e++l
  Achn004191 102 GKKRILDYT--NPGSIGHRDWNMKEFSL 127
                 *******98..45555589*******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.1E-223148IPR003441NAC domain
PROSITE profilePS5100523.7925149IPR003441NAC domain
PfamPF023652.5E-136127IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    Send to blast
MAVTFPVGFL FRPTDKEIIK HYLLKKQMGE ELPLNGVIQE GDVFSEEVLS EVFRSSETHV  60
YFFTQLKKKS VKGSNHDRTV GKATWRCESV TDICVNEKTV IGKKRILDYT NPGSIGHRDW  120
NMKEFSLDGV LLEHPQTSSD YVVCLLEKKE RAITRDRQKN RQSKRNAGGA LVNLPSDCDL  180
LINKRMRVCG ENNQRMEQYL MNSTATTFPH GLHENEVVTN TLASPAYALP VTVIESAPIA  240
QQVAAGVESM VNVVATDTLA KLPPSASYDL SECISMPPLV PAQTVDEEGG CTSGEQENRM  300
LPMEKSHWEY QPSIAAPESL AVDAIRDSII LLSATVEGFA EDFIYPFLNG NEVVDNKLSS  360
*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6QAS50.0A0A2R6QAS5_ACTCH; NAC domain-containing protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09330.43e-13NAC domain containing protein 82