PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn000661 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | NAC | ||||||||
Protein Properties | Length: 538aa MW: 59706 Da PI: 4.4994 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 150.8 | 6.5e-47 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lppGfrFhPtd elv++yLk+kv gk +++ e+i+e++iy++ PwdLp k ++k+++ ewyfF+++++ky++g r++r+t+ g+Wk+tgkd++vl ++ Achn000661 6 LPPGFRFHPTDVELVKYYLKRKVMGKGFPF-EAISELNIYNYSPWDLPdKsCLKSKDLEWYFFCPAARKYSSGARSKRSTEIGFWKSTGKDRSVLY-NE 102 79****************************.89**************96347788888**************************************.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 ++vg ktLvf++g+apkg++tdW+m ey++ Achn000661 103 QTVGSVKTLVFHTGHAPKGKRTDWLMYEYKI 133 9****************************86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.32E-55 | 3 | 156 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 52.851 | 6 | 156 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.7E-24 | 7 | 133 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 538 aa Download sequence Send to blast |
MARPSLPPGF RFHPTDVELV KYYLKRKVMG KGFPFEAISE LNIYNYSPWD LPDKSCLKSK 60 DLEWYFFCPA ARKYSSGARS KRSTEIGFWK STGKDRSVLY NEQTVGSVKT LVFHTGHAPK 120 GKRTDWLMYE YKIKEKDLAD AGVPQDAYVL CKIFQKSGPG PKANAQYGAP FKEEDWDDDA 180 EFCDQSLQYN SLPSPALPYD KFIPGSMGCA PLSMPGPSNT LSSIDVVAQP GPENEDYITL 240 WDIDKEYSSS LPDHTVNNEL VENFSQVNNN VGLTGLDGNG IYDNLGDLDN WQGMDEGEFN 300 FSSNQTTEYG AMLFSGGNNE GFVELNDLDG TVKSANSREF IPDNIYVPDN DNYMEQDCFP 360 ADSFSNVHPV SAITQLPLQP EGSNGHYDHF FAFQEMGDAD SANLGFTATS GIQNLPPLEQ 420 PEEGTRQAAQ DQNRGEQQRK PYSRLQRLLE SIPVRNALAA ELFAPANERC NETIVFSPYG 480 GSSHFKAEVT RRGGACTKDA LSENLGESPN SYSGFTLSTT GFGKEVKCGH AWNFVNW* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 1e-41 | 1 | 162 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-41 | 1 | 162 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-41 | 1 | 162 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-41 | 1 | 162 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-41 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
3swm_B | 1e-41 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
3swm_C | 1e-41 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
3swm_D | 1e-41 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
3swp_A | 1e-41 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
3swp_B | 1e-41 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
3swp_C | 1e-41 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
3swp_D | 1e-41 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
4dul_A | 1e-41 | 1 | 162 | 12 | 171 | NAC domain-containing protein 19 |
4dul_B | 1e-41 | 1 | 162 | 12 | 171 | NAC domain-containing protein 19 |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00583 | DAP | Transfer from AT5G64060 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2R6RDK6 | 0.0 | A0A2R6RDK6_ACTCH; NAC domain-containing protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6050 | 23 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64060.1 | 2e-80 | NAC domain containing protein 103 |