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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aan021282 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | MYB_related | ||||||||
Protein Properties | Length: 214aa MW: 24724.3 Da PI: 10.772 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 21.9 | 4.1e-07 | 46 | 88 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT +E+el a +q G++ +++I ++++ + q++++++ + Aan021282 46 AWTRQEEELYFTALRQVGKN-FEKITSRVQ-SKNKDQVRHYYYRL 88 6*****************99.*********.***********976 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 1.87E-10 | 38 | 93 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51293 | 13.425 | 42 | 93 | IPR017884 | SANT domain |
SMART | SM00717 | 1.7E-6 | 43 | 91 | IPR001005 | SANT/Myb domain |
Gene3D | G3DSA:1.10.10.60 | 3.7E-6 | 44 | 91 | IPR009057 | Homeodomain-like |
CDD | cd00167 | 1.91E-5 | 46 | 89 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence Send to blast |
MESQIPIDQE ASTQCDDVLI KDVITSETNL TASNQPVKKQ TRQWAAWTRQ EEELYFTALR 60 QVGKNFEKIT SRVQSKNKDQ VRHYYYRLVR RMNKLLGPEL SLDPKNTKET NAAMLRWWSL 120 LEKHSCKASK LHLKPRRFKA FMGALEKHIL KDRKKNTRKR PKQGGNSSTT PTIKPSRQRN 180 KSGITSTDAY KKWEKAAIAG VSLVADAAEH LERT |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Expressed in flowers, roots and leaves. {ECO:0000269|PubMed:15047893}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021985478.1 | 1e-123 | TSL-kinase interacting protein 1 | ||||
Swissprot | Q8LJT8 | 1e-80 | TKI1_ARATH; TSL-kinase interacting protein 1 | ||||
TrEMBL | A0A2U1P7J1 | 1e-146 | A0A2U1P7J1_ARTAN; Homeodomain-like protein | ||||
STRING | GLYMA02G05420.2 | 1e-88 | (Glycine max) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36960.2 | 5e-83 | TSL-kinase interacting protein 1 |