PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Aan020335 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | MYB_related | ||||||||||||
Protein Properties | Length: 259aa MW: 28855.2 Da PI: 6.3447 | ||||||||||||
Description | MYB_related family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26.2 | 1.9e-08 | 6 | 30 | 23 | 48 |
-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48 +W++Ia++++ Rt++++k++w+++l Aan020335 6 RWAAIASYLP-QRTDNDIKNYWNTHL 30 5*********.************996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 14.876 | 1 | 34 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 1.25E-7 | 5 | 36 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 3.2E-12 | 6 | 36 | IPR009057 | Homeodomain-like |
CDD | cd00167 | 4.61E-6 | 6 | 30 | No hit | No description |
Pfam | PF00249 | 7.8E-7 | 6 | 30 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence Send to blast |
XGKFYRWAAI ASYLPQRTDN DIKNYWNTHL KKKLNKIQGG NSCDHESHHR SRGSNSSSSS 60 ESAMSKGKWE RRLQTDIHMA KQALCEALSI DNKSINLPKI SSSIRTNSNS QIHQETAVPP 120 PSQISHSSNT YASSAENIAR LLPNWMNKPQ KSSQTSSESI STTQTHGSFD GQFSSPPSEG 180 LQHGINNNHS NNNYSNISDV SQSVSPDTSL FQDESKPNIQ DEQLPPLSFL EKWLLDDATA 240 QEQEDSLMDL SLEETNGLF |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Aan.20166 | 0.0 | trichome |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | DEVELOPMENTAL STAGE: Expression in flowers increases as the flowers develop. {ECO:0000269|PubMed:1840903}. | |||||
Uniprot | TISSUE SPECIFICITY: Expressed in flowers, leaves and weakly in seed pods. {ECO:0000269|PubMed:1840903}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. {ECO:0000305}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_023743355.1 | 1e-113 | myb-related protein 306-like | ||||
Swissprot | P81392 | 4e-48 | MYB06_ANTMA; Myb-related protein 306 | ||||
TrEMBL | A0A2U1L0U2 | 1e-180 | A0A2U1L0U2_ARTAN; Myb protein | ||||
STRING | XP_008239949.1 | 2e-57 | (Prunus mume) | ||||
STRING | EMJ10475 | 1e-57 | (Prunus persica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62470.1 | 1e-37 | myb domain protein 96 |
Publications ? help Back to Top | |||
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