PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Aan019722 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | GRAS | ||||||||||||
Protein Properties | Length: 258aa MW: 28653.2 Da PI: 10.042 | ||||||||||||
Description | GRAS family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 57.1 | 3.7e-18 | 175 | 255 | 1 | 84 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklf 84 l++lLl+cA+ v+++d ++a++lL++++++asp gd +qRla++f+++L+arla+++s++ k l +++t ++ + a++l+ Aan019722 175 LRTLLLTCAQSVAADDRRKANELLNEIRQHASPFGDGTQRLAHCFANGLEARLAGTGSQIHKGLVSKKTC---AADYIRAYHLY 255 6789***********************************************************9999987...56666666665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50985 | 15.052 | 149 | 258 | IPR005202 | Transcription factor GRAS |
Pfam | PF03514 | 1.3E-15 | 175 | 255 | IPR005202 | Transcription factor GRAS |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence Send to blast |
RVSRSSSTGG LDSPASTADT FDLYNENQMM SQFRKGAEEA NKFLPTGNLL LGSNNIGQDQ 60 KREESKLSLT KPNIRKNPYR EDITEVEKQE RVIKQAAIFP DATLRSEEMD LIFLSSLGEG 120 KVALDSFRDT LRIEKIKDSV KDVEDTSLSN GKGKGKGRSK TRGRKPKKKK EVIDLRTLLL 180 TCAQSVAADD RRKANELLNE IRQHASPFGD GTQRLAHCFA NGLEARLAGT GSQIHKGLVS 240 KKTCAADYIR AYHLYMAX |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 163 | 170 | RKPKKKKE |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022036157.1 | 1e-119 | scarecrow-like protein 9 | ||||
Refseq | XP_022036158.1 | 1e-119 | scarecrow-like protein 9 | ||||
TrEMBL | A0A1B0T6T4 | 1e-166 | A0A1B0T6T4_CHRMO; GRAS protein (Fragment) | ||||
STRING | XP_009622916.1 | 2e-79 | (Nicotiana tomentosiformis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37650.1 | 1e-43 | GRAS family protein |