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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Aan019125 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | C2H2 | ||||||||||||
Protein Properties | Length: 200aa MW: 21914.6 Da PI: 6.6258 | ||||||||||||
Description | C2H2 family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.6 | 0.0002 | 61 | 83 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H Aan019125 61 FSCNYCRRKFYSSQALGGHQNAH 83 89******************988 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57667 | 1.43E-6 | 59 | 89 | No hit | No description |
PROSITE profile | PS50157 | 11.385 | 61 | 88 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 63 | 83 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence Send to blast |
MEPPNKVFIT EEESESNNQL ASSTSEQIVT LDLTLGLSPE HATIEMSPTN PVSGSGASRV 60 FSCNYCRRKF YSSQALGGHQ NAHKRERTMA KRAMRMGMLS DRYASLASLP LHGSSFRALG 120 MEAHGSYHQA VVPQDTSFHL MRGGASFEQS YIGLPMFMED DEPELCWPGS FRQVDGVRGS 180 GMPPPPSRNS SATPDLTLKL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Acts as negative regulator of abscisic acid (ABA) signaling during germination and early seedling development. {ECO:0000269|PubMed:24808098}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021998782.1 | 5e-92 | zinc finger protein 4-like | ||||
Refseq | XP_021998783.1 | 5e-92 | zinc finger protein 4-like | ||||
Refseq | XP_021998784.1 | 5e-92 | zinc finger protein 4-like | ||||
Refseq | XP_021998785.1 | 5e-92 | zinc finger protein 4-like | ||||
Swissprot | Q39263 | 9e-42 | ZFP4_ARATH; Zinc finger protein 4 | ||||
TrEMBL | A0A2U1NAZ2 | 1e-147 | A0A2U1NAZ2_ARTAN; Zinc finger protein 7 | ||||
STRING | PGSC0003DMT400075895 | 1e-72 | (Solanum tuberosum) | ||||
STRING | PGSC0003DMT400075898 | 1e-72 | (Solanum tuberosum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66140.1 | 4e-44 | zinc finger protein 4 |
Publications ? help Back to Top | |||
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