PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aan017351

Organism

Artemisia annua

Taxonomic ID

35608

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia

Family

HB-other

Protein Properties

Length: 438aa MW: 48886.5 Da PI: 6.6403

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PUT-183a-Artemisia_annua-14116	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	54.5	2e-17	6	60	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR t+ ql++Le+ ++ ++ ps+e r eL+k+lgL+++q ++WF+NrR k+kk Aan017351 6 KRKMKTAFQLRVLEKTYAGEQWPSEELRGELSKQLGLSDQQLRMWFCNRRLKDKK 60 78999************************************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50071	15.58	1	61	IPR001356	Homeobox domain
SMART	SM00389	9.8E-16	3	65	IPR001356	Homeobox domain
SuperFamily	SSF46689	1.28E-15	5	66	IPR009057	Homeodomain-like
Pfam	PF00046	3.8E-15	6	60	IPR001356	Homeobox domain
Gene3D	G3DSA:1.10.10.60	1.1E-15	6	60	IPR009057	Homeodomain-like
CDD	cd00086	9.77E-14	6	62	No hit	No description
Pfam	PF05641	2.0E-11	118	189	IPR008395	Agenet-like domain
SMART	SM00743	4.2E-9	212	274	IPR014002	Agenet domain, plant type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence Send to blast
MDGGVKRKMK TAFQLRVLEK TYAGEQWPSE ELRGELSKQL GLSDQQLRMW FCNRRLKDKK 60 TQPEMRSKKV ISSRRRGVGE GLGGNEVGAS VGSGSGSSLF GHGERGVEKG GGLNLKVGQL 120 AEMKTFEEGF RGAWFRCKVN DIDLKKNKIK LEYYDFEEEI SWTKIYEFPP HARKPSLKKK 180 QLMLRPQYPL KYHKSELPPV NSISEICVVI DGVWKVGDMV DWYKDDCYWS ARIIKVLSKD 240 KVQLQLPMPP AGEGSDEILI AFCKDLRPSL DWSQRKGWTL PTVDGQAAAG AQLIFPSKRG 300 MTSQREEVEH TAAAGGDSPL NASSTTGTGI GISVNSSAER QISEPMDTAV FEDVKTDDMV 360 ESTDSISSMR VEESKSAAAA AAEEDVDYSV DLNIMHEETL EAPILDLEEL ANKIKWMKSI 420 LHGHRPPNND GTCWKFSS

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence Send to blast

MDGGVKRKMK TAFQLRVLEK TYAGEQWPSE ELRGELSKQL GLSDQQLRMW FCNRRLKDKK  60
TQPEMRSKKV ISSRRRGVGE GLGGNEVGAS VGSGSGSSLF GHGERGVEKG GGLNLKVGQL  120
AEMKTFEEGF RGAWFRCKVN DIDLKKNKIK LEYYDFEEEI SWTKIYEFPP HARKPSLKKK  180
QLMLRPQYPL KYHKSELPPV NSISEICVVI DGVWKVGDMV DWYKDDCYWS ARIIKVLSKD  240
KVQLQLPMPP AGEGSDEILI AFCKDLRPSL DWSQRKGWTL PTVDGQAAAG AQLIFPSKRG  300
MTSQREEVEH TAAAGGDSPL NASSTTGTGI GISVNSSAER QISEPMDTAV FEDVKTDDMV  360
ESTDSISSMR VEESKSAAAA AAEEDVDYSV DLNIMHEETL EAPILDLEEL ANKIKWMKSI  420
LHGHRPPNND GTCWKFSS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	52	59	NRRLKDKK

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Aan.18747	0.0	leaf\| trichome

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_023748921.1	1e-139	uncharacterized protein LOC111897204
TrEMBL	A0A2U1N528	0.0	A0A2U1N528_ARTAN; Agenet-like domain-containing protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.2	6e-18	Homeodomain-like transcriptional regulator