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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Aan016972 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | LBD | ||||||||||||
Protein Properties | Length: 133aa MW: 14656 Da PI: 4.6512 | ||||||||||||
Description | LBD family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 26.2 | 2.2e-08 | 9 | 92 | 10 | 90 |
DUF260 10 rkCakdCvlapyfpaeqp..kkfanvhklFGasnvlkllkal.peeeredamsslvyeAearardPvyGavgvilklqqqleql 90 +C++dC++ ++fp e+p ++ + ++ F + + + l ++ +++++ +++ +v ear + P +G +g+++++qq l ++ Aan016972 9 GECPPDCPFLEVFPVESPfkSRQELIETGFNINFIKECLLQAkTPDDQKLIIRGMVISCEARKKYPFEGDAGIFRAYQQSLVKK 92 58*************995559999************98877736666999*****************************98765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03195 | 4.6E-6 | 9 | 92 | IPR004883 | Lateral organ boundaries, LOB |
Sequence ? help Back to Top |
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Protein Sequence Length: 133 aa Download sequence Send to blast |
MPCVVCPDGE CPPDCPFLEV FPVESPFKSR QELIETGFNI NFIKECLLQA KTPDDQKLII 60 RGMVISCEAR KKYPFEGDAG IFRAYQQSLV KKEGLMKELF LLKDKCQALI DKGNVAAAED 120 AVGKGLPTDD AAA |