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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Aan016861 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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| Family |
C2H2 |
| Protein Properties |
Length: 243aa MW: 26004.7 Da PI: 9.109 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| gnl|UG|Aan#S41962792 | PU_unref | Unigene | View CDS |
| PUT-183a-Artemisia_annua-91934 | PU_ref | plantGDB | View CDS |
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| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 10.6 | 0.0017 | 37 | 60 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23
+kC+ C+k s+ + H H
Aan016861 37 FKCHVCHKKLSTAGGMAIHVLQvH 60
89**********999999986655 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 243 aa
Download sequence Send
to blast |
MGKKKKRVST SDVWCYYCDR EFDDEKILVQ HQKAKHFKCH VCHKKLSTAG GMAIHVLQVH 60
KETVSKVPNA KEGRESTDIE VYGMQGIPAD VLAAHYGEED NDTPSKVGKV EIPSQVGMLP 120
GSLGYPTMQS MRYNPGLLVP RAGWPGPPRP QPWYPQNPAG SVPPAPVGMM PQPLFPVQAM 180
RPPISTTGPP GLQPSFPVAP PGLPTSSPSG VSQPLFPVLA SSNGMPTPGS AYSSATLTAS 240
IPX
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Barely detectable in 3-days-old seedling, and then increases. {ECO:0000269|PubMed:17138694}. |
| Uniprot | TISSUE SPECIFICITY: Expressed in root, shoot apex, leaves, stem and flowers. Expressed in expanding leaves, in the vasculature of fully expanded leaves, in the inflorescence, throughout young floral primordia, in the carpels of older flowers and in fertilized ovules. {ECO:0000269|PubMed:17079264, ECO:0000269|PubMed:17138694}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Sequence-specific DNA binding factor that recognizes the 5'-CCAAATTTTAAGTTT-3' sequence. Recruits the FRI-C complex to the FLC promoter. Required for FRI-mediated FLC activation, but has no effect on the expression of MAF1, MAF2, MAF3, MAF5, UFC and CO. Dispensable for the reactivation of FLC in early embryogenesis, but required to maintain high levels of FLC expression in later embryonic and vegetative development. {ECO:0000269|PubMed:17079264, ECO:0000269|PubMed:17138694, ECO:0000269|PubMed:19121105, ECO:0000269|PubMed:21282526}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Not regulated by photoperiod or vernalization. {ECO:0000269|PubMed:17079264, ECO:0000269|PubMed:17138694}. |
