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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Aan016684 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | C2H2 | ||||||||||||
Protein Properties | Length: 244aa MW: 26004.3 Da PI: 8.8228 | ||||||||||||
Description | C2H2 family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.1 | 0.00029 | 133 | 155 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+++F++ L H r+H Aan016684 133 HECSICHRTFPTGQALGGHKRRH 155 78*******************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57667 | 2.8E-7 | 74 | 97 | No hit | No description |
Pfam | PF13912 | 9.6E-13 | 74 | 99 | IPR007087 | Zinc finger, C2H2 |
PROSITE profile | PS50157 | 11.427 | 75 | 102 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.014 | 75 | 97 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 77 | 97 | IPR007087 | Zinc finger, C2H2 |
SuperFamily | SSF57667 | 2.8E-7 | 128 | 155 | No hit | No description |
SMART | SM00355 | 0.059 | 133 | 155 | IPR015880 | Zinc finger, C2H2-like |
PROSITE profile | PS50157 | 9.203 | 133 | 155 | IPR007087 | Zinc finger, C2H2 |
Pfam | PF13912 | 6.9E-13 | 133 | 157 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 135 | 155 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence Send to blast |
MALEALNSPT TPAAPPSLHK GKRSKRPRVT MDDNNLVLPQ HASEEEYLAI CLMLLARGSP 60 TAAISTTTQP PHDTYKCSVC NKGFHSYQAL GGHKASHRKN NPEDSHSHPS TSGGAATPAA 120 ATSSVLKPSG KLHECSICHR TFPTGQALGG HKRRHYDGGS GGVTSSDGGA TSSTAPSQVV 180 QRDFDLNLPA MLPGVQLGLS VDCGKKSQLL LANEQEVESP HPSKKPRFST MEDRKLLLKL 240 EMEQ |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022036431.1 | 2e-86 | zinc finger protein ZAT10-like | ||||
TrEMBL | A0A2U1N5W4 | 1e-102 | A0A2U1N5W4_ARTAN; Zinc finger, C2H2-like protein | ||||
STRING | VIT_03s0091g00690.t01 | 7e-63 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27730.1 | 1e-37 | salt tolerance zinc finger |