PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan015551
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family MYB_related
Protein Properties Length: 339aa    MW: 37585.6 Da    PI: 8.6612
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41962971PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-127946PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.42.9e-07279322243
                      SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksr 43 
                      g+W+  Ed  l++a k ++++   +W++I + ++ gR+   c  r
        Aan015551 279 GSWSSSEDIALLNALKAFPKDvamRWEKITAAVP-GRSKAACMKR 322
                      79********************************.*******987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007172.5179232IPR001005SANT/Myb domain
PROSITE profilePS500904.286183216IPR017877Myb-like domain
SMARTSM007171.6E-4277329IPR001005SANT/Myb domain
SuperFamilySSF466893.43E-9277326IPR009057Homeodomain-like
PfamPF002494.2E-6279322IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.604.6E-6279330IPR009057Homeodomain-like
PROSITE profilePS500907.12279322IPR017877Myb-like domain
CDDcd001670.00115285322No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
GIIIIPETPN SPDLVSAMEF FDEESRPRIL LQSRSTPKST TQNQSPQTLE TIHKPTLFLS  60
LSLSATLFSL SIFYFNYDPF QSLLIWCSLS FLVGPFAPLN LTAGDIRVGQ GPTIQPSSPP  120
RYSQEPDPPK RSRFRAKKID QDDNFMTPFV PLNKTLEPIS SIRSNEKDNG SDKNAVFTEE  180
KEWSDGDLEL LRKQMVKNPV GMPGRWEAVA EVFNGRHKVE SVVKMAKSMG DRRMGGGDGD  240
SFSRFLKDRK AVDKRVDEVI ESEMEENKVV GNGGSGGGGS WSSSEDIALL NALKAFPKDV  300
AMRWEKITAA VPGRSKAACM KRVADLKKDF RSSKTSSEA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023769050.11e-141dnaJ homolog subfamily C member 2
RefseqXP_023769051.11e-141dnaJ homolog subfamily C member 2
TrEMBLA0A2J6L2E71e-140A0A2J6L2E7_LACSA; Uncharacterized protein
STRINGXP_002528771.11e-100(Ricinus communis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45420.11e-57MYB_related family protein