PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan015309
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family MYB
Protein Properties Length: 315aa    MW: 34738.7 Da    PI: 5.4243
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-56674PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding65.11.3e-201257147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +g+W++eEd+ll ++v+++G+++W++I+r ++ gRt+k+c++rw + 
        Aan015309 12 KGPWSPEEDDLLQKLVQKHGPRNWSLISRSVP-GRTGKSCRLRWCNQ 57
                     79******************************.***********985 PP
2Myb_DNA-binding59.38.4e-1966108347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++++eEd+ +v+a++q+G++ W+tIar+++ gRt++ +k++w++ 
        Aan015309  66 PFSKEEDQMIVKAHAQYGNK-WATIARMLN-GRTDNAIKNHWNST 108
                      89******************.*********.***********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129428.771762IPR017930Myb domain
SuperFamilySSF466892.55E-339105IPR009057Homeodomain-like
SMARTSM007173.5E-181160IPR001005SANT/Myb domain
PfamPF002496.5E-201257IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.6E-261365IPR009057Homeodomain-like
CDDcd001673.93E-171456No hitNo description
SMARTSM007171.4E-1663111IPR001005SANT/Myb domain
PROSITE profilePS5129421.98764113IPR017930Myb domain
CDDcd001671.28E-1366109No hitNo description
Gene3DG3DSA:1.10.10.601.7E-2366112IPR009057Homeodomain-like
PfamPF002499.9E-1666108IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MTSMVVDMDR IKGPWSPEED DLLQKLVQKH GPRNWSLISR SVPGRTGKSC RLRWCNQLSP  60
QVEHRPFSKE EDQMIVKAHA QYGNKWATIA RMLNGRTDNA IKNHWNSTLK RKCSSMGNDD  120
FSFLDGHDLV NYQPAMKRAA SLEAGTSVCT RSDTGLFFDL NSPAGSAEEP GIDICTRSDA  180
KMSFNLNDPT SSVGSNLSDS SQVVTNDPXD FTKLVLPPQP PQVAAVQISG SNNGFSKSEL  240
VAVMQEMIKS EVKNYVNGMM KNGQCMQGEV AISNAVINRM GFXLLTVSGG YLDEELTEIS  300
GDMILNPKDE ELGIF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gv2_A1e-39111133105MYB PROTO-ONCOGENE PROTEIN
1h88_C3e-39511351159MYB PROTO-ONCOGENE PROTEIN
1h89_C3e-39511351159MYB PROTO-ONCOGENE PROTEIN
1mse_C1e-39111133105C-Myb DNA-Binding Domain
1msf_C1e-39111133105C-Myb DNA-Binding Domain
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.86900.0trichome
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024972476.11e-110transcription factor MYB73-like
SwissprotO231602e-77MYB73_ARATH; Transcription factor MYB73
TrEMBLA0A2U1NDP60.0A0A2U1NDP6_ARTAN; Homeodomain-like protein
STRINGVIT_18s0001g09850.t012e-88(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.15e-79myb domain protein 73
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]