PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aan015281

Organism

Artemisia annua

Taxonomic ID

35608

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia

Family

HB-other

Protein Properties

Length: 387aa MW: 44420.7 Da PI: 4.515

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PUT-183a-Artemisia_annua-42227	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	22.6	1.8e-07	305	351	6	52
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrR 52 +++k +e+Le+++++++ p+ +++ + + ++++ ++V WF +R Aan015281 305 RLKKVDVETLERVYRRSKRPTNAMISNIVHVTKIPRKKVLKWFEDKR 351 5677889*************************************999 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50071	8.568	297	357	IPR001356	Homeobox domain
SuperFamily	SSF46689	8.55E-7	299	356	IPR009057	Homeodomain-like
CDD	cd00086	0.00133	300	351	No hit	No description
Gene3D	G3DSA:1.10.10.60	1.3E-5	305	362	IPR009057	Homeodomain-like
Pfam	PF00046	5.3E-5	305	351	IPR001356	Homeobox domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence Send to blast
FLFLGGFMAA ASLVQTIRLY SFPFVSSSSS SSRCSSSSVV TFARRRKSPS SIISSKNKKQ 60 GLRRNIAGKE GDIEEDAFEA LFKQLEEDLK NDGLTFDDDD DEITEEDLIK LERELEEALA 120 DDELQALFDD TTDEIIEMEV KDKKVVNKKG TTVNQVIEKE IPIINREKEE EEEEDESEYE 180 EEEEGDEDGD EDEDEDEGPL ELKRWQLRRL AYALKDGRRK TSIKNLAADL CLDRAIVLEL 240 LRDPPPDLLM LSATLPDKPD STILRPVIKP EDAALLASER DELKATTTKK VPVHEMHSNW 300 SAKKRLKKVD VETLERVYRR SKRPTNAMIS NIVHVTKIPR KKVLKWFEDK REEDGVPDQR 360 QPYQRNTETV QESKNSHHDT AEVEKLI

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence Send to blast

FLFLGGFMAA ASLVQTIRLY SFPFVSSSSS SSRCSSSSVV TFARRRKSPS SIISSKNKKQ  60
GLRRNIAGKE GDIEEDAFEA LFKQLEEDLK NDGLTFDDDD DEITEEDLIK LERELEEALA  120
DDELQALFDD TTDEIIEMEV KDKKVVNKKG TTVNQVIEKE IPIINREKEE EEEEDESEYE  180
EEEEGDEDGD EDEDEDEGPL ELKRWQLRRL AYALKDGRRK TSIKNLAADL CLDRAIVLEL  240
LRDPPPDLLM LSATLPDKPD STILRPVIKP EDAALLASER DELKATTTKK VPVHEMHSNW  300
SAKKRLKKVD VETLERVYRR SKRPTNAMIS NIVHVTKIPR KKVLKWFEDK REEDGVPDQR  360
QPYQRNTETV QESKNSHHDT AEVEKLI

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024961727.1	1e-149	protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3
TrEMBL	A0A251U827	1e-145	A0A251U827_HELAN; Putative homeodomain-like protein
STRING	VIT_04s0008g05190.t01	1e-104	(Vitis vinifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11270.1	1e-54	overexpressor of cationic peroxidase 3