PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aan015281 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | HB-other | ||||||||
Protein Properties | Length: 387aa MW: 44420.7 Da PI: 4.515 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 22.6 | 1.8e-07 | 305 | 351 | 6 | 52 |
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrR 52 +++k +e+Le+++++++ p+ +++ + + ++++ ++V WF +R Aan015281 305 RLKKVDVETLERVYRRSKRPTNAMISNIVHVTKIPRKKVLKWFEDKR 351 5677889*************************************999 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50071 | 8.568 | 297 | 357 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 8.55E-7 | 299 | 356 | IPR009057 | Homeodomain-like |
CDD | cd00086 | 0.00133 | 300 | 351 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 1.3E-5 | 305 | 362 | IPR009057 | Homeodomain-like |
Pfam | PF00046 | 5.3E-5 | 305 | 351 | IPR001356 | Homeobox domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 387 aa Download sequence Send to blast |
FLFLGGFMAA ASLVQTIRLY SFPFVSSSSS SSRCSSSSVV TFARRRKSPS SIISSKNKKQ 60 GLRRNIAGKE GDIEEDAFEA LFKQLEEDLK NDGLTFDDDD DEITEEDLIK LERELEEALA 120 DDELQALFDD TTDEIIEMEV KDKKVVNKKG TTVNQVIEKE IPIINREKEE EEEEDESEYE 180 EEEEGDEDGD EDEDEDEGPL ELKRWQLRRL AYALKDGRRK TSIKNLAADL CLDRAIVLEL 240 LRDPPPDLLM LSATLPDKPD STILRPVIKP EDAALLASER DELKATTTKK VPVHEMHSNW 300 SAKKRLKKVD VETLERVYRR SKRPTNAMIS NIVHVTKIPR KKVLKWFEDK REEDGVPDQR 360 QPYQRNTETV QESKNSHHDT AEVEKLI |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024961727.1 | 1e-149 | protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3 | ||||
TrEMBL | A0A251U827 | 1e-145 | A0A251U827_HELAN; Putative homeodomain-like protein | ||||
STRING | VIT_04s0008g05190.t01 | 1e-104 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11270.1 | 1e-54 | overexpressor of cationic peroxidase 3 |