PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan015184
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family C2H2
Protein Properties Length: 398aa    MW: 42991.4 Da    PI: 6.1768
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41947906PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-71114PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H218.55.4e-06262284123
                EEETTTTEEESSHHHHHHHHHHT CS
    zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                ++C++Cg +F+ ++ ++rH+  H
  Aan015184 262 HQCSICGLRFKLQEWFERHMEWH 284
                79******************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576674.56E-5261284No hitNo description
PROSITE profilePS501579.182262289IPR007087Zinc finger, C2H2
PROSITE patternPS000280264284IPR007087Zinc finger, C2H2
SuperFamilySSF576674.56E-5324342No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    Send to blast
MKFLKNLKII CDGSSQVQIF LSRSQRQIST GLSSQSPQGS FSIRPQISQA HKLQPPSPQL  60
PVKHASFLPP YQPEPVSEFS TESPKTTSVS ASPLVSSLLA RPKSLVADIP GPPSSSSLLA  120
AVSSIFANKP ITSTSSSTHT KPASNNVTNL LSTLVAKGLI SASENDQSLS GPSPTSQKVD  180
QPLSGPTSTS QKVSPVVASS LLSTPSTSSE LTPSKPVVKS AVTIPPSIDE DIKCLIGFDF  240
KANVIREFHP SVISDLIDDL PHQCSICGLR FKLQEWFERH MEWHTLKNSE SNTSRSWFSN  300
CDEWVNGPNN ESVFEIDGEQ MVTADESQIV CVLCGEMFDD HYSPERNKWL FKGATYLKVT  360
SGIVGNSNNG VVVHVNCISE HSLSDLGLAN DVKVENDV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022024430.11e-130polyadenylation and cleavage factor homolog 4-like isoform X1
RefseqXP_022024434.11e-130polyadenylation and cleavage factor homolog 4-like isoform X2
TrEMBLA0A2U1M3730.0A0A2U1M373_ARTAN; Zinc finger, C2H2, ENTH/VHS
STRINGVIT_08s0007g03880.t011e-67(Vitis vinifera)