PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan015148
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family MYB_related
Protein Properties Length: 345aa    MW: 39949.6 Da    PI: 9.5753
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41907983PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-141160996PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.72.7e-13141180446
                      S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      +T+eEde l+++++++G++ Wk+Ia  mg  +++ ++k+ w+ 
        Aan015148 141 FTPEEDETLKKYHEKYGNK-WKKIAVLMG--KSRLHVKDNWRR 180
                      8******************.********8..8*******9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.0E-665128IPR009057Homeodomain-like
SMARTSM007173.9E-465135IPR001005SANT/Myb domain
SuperFamilySSF466892.5E-10113181IPR009057Homeodomain-like
PROSITE profilePS5129411.651135188IPR017930Myb domain
SMARTSM007175.6E-7137184IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.2E-10140180IPR009057Homeodomain-like
CDDcd001673.88E-6141182No hitNo description
PfamPF139217.1E-13141199No hitNo description
PROSITE profilePS500906.179187251IPR017877Myb-like domain
SMARTSM007174.5187253IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.605.8E-5189269IPR009057Homeodomain-like
SuperFamilySSF466891.87E-7231308IPR009057Homeodomain-like
PROSITE profilePS500907.062252305IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    Send to blast
XVSLKSKVVK PKTRQPDPLK TIREKLKTKE KGKSKKLASP AMLRVFPSSD TGSENQTTKG  60
DGLVRGKRFT PEEDAKIKEA VNNYIEDNNL GDDGLTMVLN CGAYKMRKCW QEIVKCIPYR  120
PHAAVYNRAH VLFERNDTRG FTPEEDETLK KYHEKYGNKW KKIAVLMGKS RLHVKDNWRR  180
IKLGNPKAGK WVQKEYQDLY DLVNMDLKMK VYCEKKSKHG MLRDNIPWGA ISEKLSTRSD  240
ARCCVKWYKL RSPLVAQGLW SDTDDYLMIG KLYELDAACA DDVDWDNLLE HRTGDICRKR  300
WDQMVKHIGD YGSKPFAEQV DILAERYSPD LAEDREAWDN KPVVP
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.191280.0trichome
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021992906.11e-155RNA polymerase I termination factor-like
TrEMBLA0A2U1LK080.0A0A2U1LK08_ARTAN; SANT/Myb domain, Homeodomain-like protein
STRINGPOPTR_0015s10710.11e-134(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41020.11e-112MYB_related family protein