PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan015032
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family C2H2
Protein Properties Length: 247aa    MW: 26802 Da    PI: 9.0354
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-75048PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.79.6e-06129151223
                EETTTTEEESSHHHHHHHHHH.T CS
    zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                +C+ Cg++F+  ++L++H+ + H
  Aan015032 129 VCSQCGEVFPKTESLEHHQAVrH 151
                8******************9888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.162128156IPR007087Zinc finger, C2H2
PROSITE patternPS000280128151IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    Send to blast
MDVIGPNKDP VPVKNPNGYS KLSSCSSICS FKDVVHGNTR VVHRADHSPD SSTVGLDAGL  60
LSRKKHVNDG GSSSSSKTLT GSSVRSNGHH VNYTSCSRGM QFRKLSGCYE CHAIVDPSRY  120
TIPRSTICVC SQCGEVFPKT ESLEHHQAVR HAVSELGPED SGRNIVEIIF KSSWLKKDHP  180
IFTIERILKV QNTRRTIQRF EDCRDAVKSR ASATRCAAEA MSSSASIAPP SHALWATATP  240
PVSAPPX
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022008754.11e-124uncharacterized protein LOC110908163
TrEMBLA0A2U1KP341e-157A0A2U1KP34_ARTAN; C2H2-like zinc finger protein
TrEMBLA0A2U1P7301e-158A0A2U1P730_ARTAN; C2H2-like zinc finger protein
STRINGXP_002510523.17e-99(Ricinus communis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.12e-75C2H2-like zinc finger protein