PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan014682
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family MYB_related
Protein Properties Length: 305aa    MW: 34156.1 Da    PI: 4.3037
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-92697PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.66e-08104152247
                      SSS-HHHHHHHHHHHH....HTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavk....qlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +W++eE++l+ d+v      +G++ W+  +  ++  Rt k+++s+++++
        Aan014682 104 SNWSEEEEQLFQDVVYsnpvSHGKRFWEQLSIAFP-SRTKKEIVSYYFNV 152
                      58*************7233368999**********.***********996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007178.2E-4102155IPR001005SANT/Myb domain
SuperFamilySSF466892.96E-5103153IPR009057Homeodomain-like
PROSITE profilePS500906.133104153IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.601.6E-4105151IPR009057Homeodomain-like
CDDcd001674.44E-7105153No hitNo description
PfamPF002492.2E-6105152IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
XRVSPRKEVP VGPEYQADVP EFDSESAKSY ISDNGEHSFM GICVISDQEG EVKTAQAECS  60
CLDSGSIRCV QQHVSEARLN LKECLGHEIF IELGFGNMGE EVSSNWSEEE EQLFQDVVYS  120
NPVSHGKRFW EQLSIAFPSR TKKEIVSYYF NVFILRRRAV QNRSHLLAID SDDDEWWGPK  180
RETSGATIED EDFHVVEPFA DHQGHDFSSE AGDEIGGAEG DDQRQTNEGS STIIHDEKVI  240
TSENEQEKPL NLNKQEANSS GVRSESYLHW DPPYSTMGPT KGVDLLPTCS MIEEIFGSSK  300
TSKGT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021976336.11e-134uncharacterized protein LOC110871890
RefseqXP_021976338.11e-134uncharacterized protein LOC110871890
TrEMBLA0A2U1KAF60.0A0A2U1KAF6_ARTAN; ELM2 domain-containing protein
STRINGEOY017451e-64(Theobroma cacao)