PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Aan014635 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | bHLH | ||||||||||||
Protein Properties | Length: 261aa MW: 28934.5 Da PI: 6.1718 | ||||||||||||
Description | bHLH family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 29.9 | 1e-09 | 107 | 154 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN ++ L+el+P + +k a++L + +++++sLq Aan014635 107 SHSLAERARREKINARMKLLQELVPGC----NKISGTAMVLDEIINHVQSLQ 154 8*************************9....89999***************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 1.08E-9 | 101 | 158 | No hit | No description |
SuperFamily | SSF47459 | 2.75E-15 | 101 | 170 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 14.634 | 103 | 153 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.9E-15 | 103 | 169 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 3.1E-7 | 107 | 154 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 7.2E-9 | 109 | 159 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence Send to blast |
XLDRSSFTAL LELPANQVVK LLDSPVGFPV PEGGNNDVNL VKEEPVELRN SEDSDPVVSK 60 SVKRKEREKK VKLPVKKSKN VVNESDGDKE KLPYVHVRAR RGQATDSHSL AERARREKIN 120 ARMKLLQELV PGCNKISGTA MVLDEIINHV QSLQRQVEFL SMRLAAVHPS IDINIDNMFS 180 AESGSLMDCN FHGMVSPPLS LDGQINGHSQ QLWQPDGLPP QPLWGAEEVN PNFITPENSL 240 LSYDSSGNSA SLHTNQLKME L |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Aan.18689 | 0.0 | leaf |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Expressed in leaves, stems, and flowers. {ECO:0000269|PubMed:12679534}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021971622.1 | 1e-129 | transcription factor bHLH48-like | ||||
Swissprot | Q8VZ02 | 3e-60 | BH048_ARATH; Transcription factor bHLH48 | ||||
TrEMBL | A0A2U1MS85 | 0.0 | A0A2U1MS85_ARTAN; Basic helix-loop-helix (BHLH) DNA-binding superfamily protein | ||||
STRING | EOY09403 | 1e-107 | (Theobroma cacao) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57800.2 | 1e-64 | bHLH family protein |
Publications ? help Back to Top | |||
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