PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan011769
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family G2-like
Protein Properties Length: 118aa    MW: 13328.8 Da    PI: 9.5145
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55211809PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like95.54e-304497155
    G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
               kpr++W+ +LH++Fv av+qL G+ekA+Pk+il+lm+v+gLt+e+v+SHLQkYRl
  Aan011769 44 KPRVVWSIDLHRKFVAAVNQL-GIEKAVPKRILDLMNVEGLTRENVASHLQKYRL 97
               79*******************.********************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.42741100IPR017930Myb domain
SuperFamilySSF466891.97E-2041101IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.8E-3141102IPR009057Homeodomain-like
TIGRFAMsTIGR015576.9E-264497IPR006447Myb domain, plants
PfamPF002499.1E-74696IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    Send to blast
MEVKVDKKAG SGDPNGKLNR KRKDDDEDSE DNGNEDDESS TQKKPRVVWS IDLHRKFVAA  60
VNQLGIEKAV PKRILDLMNV EGLTRENVAS HLQKYRLYLK RISQQANMVV AFGGSKDX
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A4e-2840103164ARR10-B
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}.
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021990178.17e-68two-component response regulator ARR12-like
SwissprotA2X1N21e-43ORR24_ORYSI; Two-component response regulator ORR24
SwissprotQ6H8051e-43ORR24_ORYSJ; Two-component response regulator ORR24
TrEMBLA0A2U1MXR41e-68A0A2U1MXR4_ARTAN; Two-component response regulator
TrEMBLA0A2U1MXR63e-68A0A2U1MXR6_ARTAN; Two-component response regulator
STRINGXP_009593176.13e-51(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.13e-34response regulator 12
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]