PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aan010516 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | MYB_related | ||||||||
Protein Properties | Length: 157aa MW: 18215 Da PI: 10.482 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33.9 | 7.5e-11 | 5 | 41 | 1 | 37 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-H CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtl 37 +g+W+ eEd++l+ ++++ G ++W++ +++ g+ R+ Aan010516 5 KGPWSHEEDQILISYIQKNGHPNWRALPKHAGLLRCS 41 79******************************88875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 12.71 | 1 | 53 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 1.35E-8 | 2 | 39 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 2.5E-12 | 3 | 41 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 1.5E-8 | 5 | 41 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 4.22E-5 | 7 | 36 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 157 aa Download sequence Send to blast |
MGLNKGPWSH EEDQILISYI QKNGHPNWRA LPKHAGLLRC STSYHRKCLP RNIKFDDEGD 60 NDAATRAWNG LLPKSRALMY CKKHEIINGL GTPARRLKVR NILHSKRDQR SETPKNKKKA 120 DDDLPINFLM KKMNLNKKKD DDDLPINFQM KKMNLGD |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Aan.18461 | 0.0 | leaf |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024966145.1 | 3e-20 | protein ENHANCED DOWNY MILDEW 2-like | ||||
TrEMBL | A0A2U1MQK1 | 7e-63 | A0A2U1MQK1_ARTAN; Zinc finger, PHD-type | ||||
STRING | XP_007146547.1 | 5e-17 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31180.1 | 4e-17 | myb domain protein 14 |