PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aan010269 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | C2H2 | ||||||||
Protein Properties | Length: 164aa MW: 19082.1 Da PI: 4.0389 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.4 | 0.001 | 17 | 38 | 1 | 22 |
EEETTTTEEESSHHHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt 22 + C Cgk F++ + k+H ++ Aan010269 17 FYCVACGKKFKSDKQWKNHEQS 38 78*****************876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57667 | 5.69E-14 | 10 | 56 | No hit | No description |
SMART | SM00451 | 6.4E-4 | 14 | 48 | IPR003604 | Zinc finger, U1-type |
PROSITE profile | PS50157 | 9.099 | 17 | 46 | IPR007087 | Zinc finger, C2H2 |
Pfam | PF12171 | 4.4E-11 | 17 | 42 | IPR022755 | Zinc finger, double-stranded RNA binding |
PROSITE pattern | PS00028 | 0 | 19 | 41 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00018 | 0 | 66 | 78 | IPR018247 | EF-Hand 1, calcium-binding site |
Pfam | PF10551 | 1.7E-6 | 126 | 162 | IPR018289 | MULE transposase domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003676 | Molecular Function | nucleic acid binding | ||||
GO:0008270 | Molecular Function | zinc ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 164 aa Download sequence Send to blast |
ESEVEEEVEV EEKRNEFYCV ACGKKFKSDK QWKNHEQSKK HKEKVAELRD AFSEEDRENE 60 EEEEDDDDED GFVSVDEVEK LKEEFEGVEI RKEEKGGDDE SQSDEEFVDV GNGEKEEDDN 120 EDDEDTTPRV IVTDRDLALV GACRAKFPTA HKVLCRCHIE QNLX |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024969963.1 | 8e-36 | DNAJ protein JJJ1 homolog | ||||
Swissprot | Q9C911 | 2e-15 | JJJ1_ARATH; DNAJ protein JJJ1 homolog | ||||
TrEMBL | A0A103YCB1 | 2e-34 | A0A103YCB1_CYNCS; DnaJ domain-containing protein (Fragment) | ||||
STRING | Migut.D01668.1.p | 1e-20 | (Erythranthe guttata) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G74250.1 | 1e-15 | DNAJ heat shock N-terminal domain-containing protein |