PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aan009992 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | C2H2 | ||||||||
Protein Properties | Length: 172aa MW: 19242.8 Da PI: 8.5188 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 10.9 | 0.0014 | 46 | 68 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F++ L H +H Aan009992 46 FECKTCNRQFPSFQALGGHRASH 68 89**********99999998887 PP | |||||||
2 | zf-C2H2 | 10.9 | 0.0014 | 91 | 113 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs L H+r+H Aan009992 91 HECSICGLEFSIGQALGGHMRRH 113 78********************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57667 | 9.29E-9 | 44 | 113 | No hit | No description |
Pfam | PF13912 | 2.8E-13 | 45 | 70 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.16 | 46 | 68 | IPR015880 | Zinc finger, C2H2-like |
PROSITE profile | PS50157 | 9.827 | 46 | 73 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 48 | 68 | IPR007087 | Zinc finger, C2H2 |
Pfam | PF13912 | 9.1E-10 | 91 | 114 | IPR007087 | Zinc finger, C2H2 |
PROSITE profile | PS50157 | 9.162 | 91 | 118 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.32 | 91 | 113 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 93 | 113 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence Send to blast |
MVYLPMKRSR EAERDTAISN MANCLMLLSR GPSSHEPHDN SPSRVFECKT CNRQFPSFQA 60 LGGHRASHKK PRLEGDLTHG TNLAPPKPKS HECSICGLEF SIGQALGGHM RRHRTTATND 120 NQFSASSDLS NPVVEKVNSR RIFSLDLNLT PLENDLESRF EKVVPTTIEL FI |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Aan.10161 | 0.0 | trichome |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Expressed in leaves. {ECO:0000269|PubMed:9132053}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in stress responses. {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024991277.1 | 3e-96 | zinc finger protein ZAT11-like | ||||
Swissprot | Q9SLD4 | 3e-40 | ZAT11_ARATH; Zinc finger protein ZAT11 | ||||
TrEMBL | A0A2U1LZ13 | 1e-122 | A0A2U1LZ13_ARTAN; Zinc finger, C2H2 | ||||
STRING | XP_009762518.1 | 1e-64 | (Nicotiana sylvestris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37430.1 | 1e-42 | C2H2 family protein |