PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aan006119

Organism

Artemisia annua

Taxonomic ID

35608

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia

Family

bHLH

Protein Properties

Length: 309aa MW: 34772.2 Da PI: 7.524

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PUT-183a-Artemisia_annua-127941	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.6	5.2e-09	137	184	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+ ++P + +k Ka +L + ++Y++sLq Aan006119 137 SHSLAERVRREKISERMKLLQAIVPGC----DKVTGKALMLDEIINYVQSLQ 184 8***********************9....555***************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	1.7E-16	131	200	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	1.26E-9	131	188	No hit	No description
Gene3D	G3DSA:4.10.280.10	7.3E-16	133	199	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	15.11	133	183	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	3.0E-6	137	184	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	1.3E-9	139	189	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence Send to blast
MAALSNNQHH SYLLDQNVFF SNPPITNLPQ YHQLLDHAFH GHHHDQVSPD SSMSMVLDDQ 60 KVESGNDLLA KKRKDKQLSS VNNAQSKDTS KMKKQKKSND CQEEKKKKNA KKIVSGEEEG 120 AIGYIHVRAR RGQATDSHSL AERVRREKIS ERMKLLQAIV PGCDKVTGKA LMLDEIINYV 180 QSLQNQVEFL SMKLASVNPM LYDFGVDMDA FMLKPDENMS NMVLPIMPSA QQCNPNGAAA 240 TFVPANDNYH NHLPQLDGSA TTNSLLFQQS QMPNILSSQG HGQHLWNMDE QRPKLDNHFA 300 ISNNLSSFH

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024970817.1	1e-161	transcription factor bHLH137 isoform X1
TrEMBL	A0A124SGE4	1e-154	A0A124SGE4_CYNCS; Myc-type, basic helix-loop-helix (BHLH) domain-containing protein (Fragment)
STRING	EOY22603	5e-78	(Theobroma cacao)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50915.2	1e-51	bHLH family protein