PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aan005642 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | WRKY | ||||||||
Protein Properties | Length: 352aa MW: 39363.3 Da PI: 9.3938 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 67.9 | 1.5e-21 | 111 | 167 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dD y+WrKYGqK+vk+ +r+YY+C++ C +kk e ++ ++v++i+Y+g+H+h+ Aan005642 111 DDSYTWRKYGQKQVKSPGSSRGYYKCSYGACDAKK-FESYDQFNSVIKIVYKGQHKHD 167 8********************************99.9*9999***************7 PP | |||||||
2 | WRKY | 89.4 | 3.1e-28 | 247 | 304 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dgy+WrKYGqK+vkg+++pr+YY+C +agCpv+k++e + + v+itY+g Hnh+ Aan005642 247 ADGYRWRKYGQKMVKGTPHPRNYYKCIFAGCPVRKHIENVVNGSSEVTITYKGLHNHD 304 6********************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.2E-19 | 100 | 169 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 17.259 | 105 | 169 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.53E-18 | 106 | 169 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.0E-15 | 110 | 168 | IPR003657 | WRKY domain |
Pfam | PF03106 | 9.3E-16 | 111 | 167 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 6.2E-30 | 231 | 306 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.24E-25 | 240 | 306 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 29.562 | 241 | 306 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.1E-30 | 246 | 305 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.0E-21 | 248 | 304 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 352 aa Download sequence Send to blast |
MDDNDDNTTA HPTSLVISAD LSEVPLIYDV RQDELDRFKN HLQGSHQDAL ATIIAQAHSE 60 SEIKSSPTGL SVMPVTLSPE VQIHKEKLTW HKXNEEETAD LKSLPAVQTP DDSYTWRKYG 120 QKQVKSPGSS RGYYKCSYGA CDAKKFESYD QFNSVIKIVY KGQHKHDPPK KVIPKGDEML 180 STPESLKRKT TSTSGLKENQ SSGCAPIQIV HIDDSLVKPR PRYEYVPKHP KKPKFSVQAA 240 ADIEISADGY RWRKYGQKMV KGTPHPRNYY KCIFAGCPVR KHIENVVNGS SEVTITYKGL 300 HNHDMPVPRK GQGPPSDALI TAVSSAFKNI SQPTRRESAP TLLSIGFKIK QC |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 2e-23 | 236 | 307 | 7 | 78 | Probable WRKY transcription factor 4 |
2lex_A | 2e-23 | 236 | 307 | 7 | 78 | Probable WRKY transcription factor 4 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024968177.1 | 1e-124 | probable WRKY transcription factor 32 | ||||
Swissprot | P59583 | 2e-66 | WRK32_ARATH; Probable WRKY transcription factor 32 | ||||
TrEMBL | A0A2U1L2G5 | 0.0 | A0A2U1L2G5_ARTAN; DNA-binding WRKY | ||||
STRING | Solyc07g005650.2.1 | 4e-70 | (Solanum lycopersicum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G30935.1 | 8e-69 | WRKY DNA-binding protein 32 |