PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Aan004072 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | C2H2 | ||||||||||||
Protein Properties | Length: 209aa MW: 22385.5 Da PI: 9.0114 | ||||||||||||
Description | C2H2 family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.4 | 0.00023 | 109 | 131 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+++F++ L H r+H Aan004072 109 HECSICHRTFPTGQALGGHKRRH 131 78*******************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13912 | 2.6E-13 | 52 | 77 | IPR007087 | Zinc finger, C2H2 |
SuperFamily | SSF57667 | 9.14E-5 | 52 | 78 | No hit | No description |
SMART | SM00355 | 0.067 | 53 | 75 | IPR015880 | Zinc finger, C2H2-like |
PROSITE profile | PS50157 | 9.182 | 53 | 80 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 55 | 75 | IPR007087 | Zinc finger, C2H2 |
SuperFamily | SSF57667 | 1.29E-5 | 106 | 133 | No hit | No description |
PROSITE profile | PS50157 | 9.203 | 109 | 131 | IPR007087 | Zinc finger, C2H2 |
Pfam | PF13912 | 3.1E-13 | 109 | 133 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.059 | 109 | 131 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 111 | 131 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence Send to blast |
XISSTVSEPQ HPTEEEYLAF CLMLLSRGGT GVGSQKPTPT QAQSPPRPPL VVHKCTVCNK 60 GFGSYQALGG HKASHRKNTS DDQHHHPTTS NTTTTSASSS VLKPSGRIHE CSICHRTFPT 120 GQALGGHKRR HYDGGNNSGP AASGVTTSEK TSSSTHSQPR DFDLNLLPAA SPLGLNVDFL 180 KKSQLFEEQE VESPHPAKKQ RFSGGVANY |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Aan.56594 | 0.0 | trichome |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022028019.1 | 2e-78 | zinc finger protein ZAT10-like | ||||
TrEMBL | A0A251V676 | 4e-77 | A0A251V676_HELAN; Putative zinc finger protein | ||||
STRING | VIT_03s0091g00690.t01 | 6e-57 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27730.1 | 3e-38 | salt tolerance zinc finger |