PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan004043
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family DBB
Protein Properties Length: 212aa    MW: 23247.9 Da    PI: 6.3833
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41932537PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-31014PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box23.21.4e-07433534
   zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeH 34
                C+ +e+  ++lfC  ++  lC+ C ++ H
  Aan004043  4 LCDVCESAAAILFCAADEAALCRACDEKVH 33
               7**************************998 PP

2zf-B_box24.94.1e-085291237
   zf-B_box  2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....H 37
               + ++C+ +e+ ++ ++C  +++ lC +C ++ H g    H
  Aan004043 52 DVQRCDICENAPAFFYCGIDGSSLCLQCDMNVHVGgkrtH 91
               5789****************************96545555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003361.5E-8147IPR000315B-box-type zinc finger
PROSITE profilePS5011910.153147IPR000315B-box-type zinc finger
PfamPF006434.8E-6341IPR000315B-box-type zinc finger
CDDcd000212.37E-7345No hitNo description
PROSITE profilePS501198.5745196IPR000315B-box-type zinc finger
SMARTSM003361.1E-95196IPR000315B-box-type zinc finger
PfamPF006431.0E-55391IPR000315B-box-type zinc finger
CDDcd000214.37E-65584No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005622Cellular Componentintracellular
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    Send to blast
MRTLCDVCES AAAILFCAAD EAALCRACDE KVHMCNKLAS RHVRVGLADP SDVQRCDICE  60
NAPAFFYCGI DGSSLCLQCD MNVHVGGKRT HGRYLLLRQR VEFPGDRSGR DDELGLQPGD  120
PGGEVRREQN NQPKATTRDN QHHRLSAIGM LENNNDGAGR MENKLFDLNA RPQRMHGQTS  180
NNQEQGMDIS GSGNNDSASV VPVGSFKREA DK
Functional Description ? help Back to Top
Source Description
UniProtActs as negative regulator of seedling photomorphogenesis. {ECO:0000269|PubMed:18540109}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024990848.11e-135B-box zinc finger protein 19-like isoform X1
SwissprotC0SVM51e-82BBX19_ARATH; B-box zinc finger protein 19
TrEMBLA0A2U1LAI41e-155A0A2U1LAI4_ARTAN; Zinc finger, B-box
TrEMBLA0A3S6E9H51e-155A0A3S6E9H5_CHRMO; BBX19 protein (Fragment)
STRINGcassava4.1_016111m1e-119(Manihot esculenta)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38960.16e-85DBB family protein