PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Aan003890 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | bHLH | ||||||||||||
Protein Properties | Length: 224aa MW: 25523 Da PI: 8.4668 | ||||||||||||
Description | bHLH family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.4 | 0.00029 | 170 | 206 | 13 | 54 |
HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R+++++ ++Lre++P k ++ +++ +Av+Y+ksL Aan003890 170 REKMRKMVNTLREIVPGG-----KQMNSVAVIDEAVKYLKSL 206 7999************87.....67***************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 11.293 | 157 | 206 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 6.5E-5 | 164 | 212 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 8.7E-7 | 165 | 214 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 4.48E-4 | 167 | 211 | No hit | No description |
SuperFamily | SSF47459 | 1.57E-7 | 167 | 213 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence Send to blast |
MQSDHQHLHS NTKLPLADQV GRGYIPNPHI ASFFSQNVDF QPSKICPRNF IIFDRTDNRS 60 QIMYHPAVSP GIVQPGTSYI EKNMLVRNNI NAPRELNSVM KEDSADIDLL LSFEEEDSEE 120 EYEEDELSTA LTHRNDLKDT ADSCSSRLVK SRLALSSFSR KSSGSSERKR EKMRKMVNTL 180 REIVPGGKQM NSVAVIDEAV KYLKSLKLEL QKVVCRNLKK LKLL |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Aan.19694 | 0.0 | trichome |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024982738.1 | 4e-89 | transcription factor bHLH144-like | ||||
TrEMBL | A0A103Y1M0 | 9e-88 | A0A103Y1M0_CYNCS; Myc-type, basic helix-loop-helix (BHLH) domain-containing protein | ||||
STRING | XP_002519719.1 | 4e-51 | (Ricinus communis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29950.2 | 1e-21 | bHLH family protein |