PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Aan003774 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | bHLH | ||||||||||||
Protein Properties | Length: 235aa MW: 26383.1 Da PI: 5.4763 | ||||||||||||
Description | bHLH family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 38.2 | 2.6e-12 | 78 | 124 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + rE++RRdr+N++f eL ++l + + +K +K +iL A++ I +L Aan003774 78 KAGREKQRRDRMNERFLELGSILEHG---RPPKTDKTAILSDAIRMIMQL 124 5669*********************8...89*****************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 12.913 | 73 | 124 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 8.2E-10 | 78 | 124 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 5.5E-13 | 79 | 143 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.1E-8 | 79 | 130 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 8.5E-13 | 81 | 147 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 8.13E-9 | 81 | 129 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence Send to blast |
MEIDENSNWL LDYGLMDDIS TVVDYVAPPA VVVGFSWPSD IPAVSSEIES SFIDFEGLKG 60 AGSRKRLKSE CSNVCGSKAG REKQRRDRMN ERFLELGSIL EHGRPPKTDK TAILSDAIRM 120 IMQLRSEAER LNESNVDLQE KIKELKAEKN ELRDEKQRLK VEKEKLEQQV KTMNIGQPSY 180 LAHPTAMRGA FAAQEQAAGN KLMPFVGYPS VAMWQFMPSS VVDTSLDHVL RPPVA |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Widely expressed throughout development, mostly in vasculatures. {ECO:0000269|PubMed:17028341}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Plays a role in resistance to amide-linked indole-3-acetic acid (IAA) conjugates such as IAA-Leu and IAA-Phe. May regulate gene expression in response to metal homeostasis changes. {ECO:0000269|PubMed:17028341}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_023755205.1 | 1e-133 | transcription factor ILR3-like | ||||
Swissprot | Q9FH37 | 1e-86 | ILR3_ARATH; Transcription factor ILR3 | ||||
TrEMBL | A0A2U1NLB8 | 1e-171 | A0A2U1NLB8_ARTAN; Myc-type, basic helix-loop-helix (BHLH) domain-containing protein | ||||
STRING | VIT_12s0059g02650.t01 | 1e-109 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54680.1 | 4e-71 | bHLH family protein |