PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan001901
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family bZIP
Protein Properties Length: 386aa    MW: 41218.8 Da    PI: 5.2933
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55099582PU_refUnigeneView CDS
PUT-183a-Artemisia_annua-76344PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_166.93.4e-21283345163
                XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                e+elkr+rrkq+NRe+ArrsR+RK+ae++eL+++++ L+ eN +L+ e+ +l+  +++l +++
  Aan001901 283 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEGLKDENASLRAEVGRLRSDYEQLLAQN 345
                89*********************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077773.6E-271100IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165962.6E-21141254No hitNo description
Gene3DG3DSA:1.20.5.1703.0E-18276345No hitNo description
SMARTSM003381.1E-22283347IPR004827Basic-leucine zipper domain
PfamPF001701.1E-19283345IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.921285348IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.75E-11286342No hitNo description
CDDcd147025.42E-22288338No hitNo description
PROSITE patternPS000360290305IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    Send to blast
MGSSEMDKSP KEAKDSTKES KPANSQEQTS GTGTATGTVN PDWSGFQPYP HMPPHGYMAS  60
SPQAHPYMWG VQHIMPPYGT PPHPYVMYPP GGIYAHPSMP PGSYPFGPYA MPSPNGVAEA  120
SGNTTGNTEV DGKSPDGKEN FPLKGQKEVW AXLNMITGKK NEQNKAAANG GYPKSAESGS  180
EGSSEGSDGN SENGSQMKSG SRQDSIEATG EGSQNGNSAN GGPNAPVNQT VAGPATNLNI  240
GMEYWNGANS PNMPAMHGKV ASGQVAGAMT PGARESQIWL QDERELKRQR RKQSNRESAR  300
RSRLRKQAEC DELAQRAEGL KDENASLRAE VGRLRSDYEQ LLAQNAALKE RLGEIPGQEL  360
MAGGNDQQMG TDDHQGEQLE LVQDAQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1299305RRSRLRK
2299306RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022029000.10.0bZIP transcription factor 16-like isoform X1
SwissprotQ501B21e-136BZP16_ARATH; bZIP transcription factor 16
TrEMBLA0A2U1L1J90.0A0A2U1L1J9_ARTAN; Basic region/leucine zipper transcription factor 68
STRINGXP_002518994.11e-170(Ricinus communis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32150.11e-120basic region/leucine zipper transcription factor 68
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]