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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Aan000931 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
|
| Family |
C2H2 |
| Protein Properties |
Length: 302aa MW: 33097.8 Da PI: 4.6099 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| gnl|UG|Aan#S41960460 | PU_unref | Unigene | View CDS |
| gnl|UG|Aan#S55058516 | PU_unref | Unigene | View CDS |
| PUT-183a-Artemisia_annua-49076 | PU_ref | plantGDB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 15.5 | 5.1e-05 | 276 | 299 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23
y+C+ C++ F++ L++H + H
Aan000931 276 YSCKSCNRNFKTDGALQSHNQAkH 299
99*****************76555 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 302 aa
Download sequence Send
to blast |
MEFWGVEVKS GETFEVNLDD DKVLHLSQAC LGETKNSKGE SVCLHINVEG KKLVLGTLHS 60
ERLPQQLFDL VFDKTFTISH NWKNGSVYFY GYQADQPSED SEMESEEDSE EEEEAIRLPV 120
PNGKQEAKKE VKETKKEEKS VASNKKDAKQ VTIVEPEKDD SDDSDSDDSD DSDSMNADSG 180
SDEEGSGKDS SDDSDDSSDE EEETPKKPES GKKRPSESAI KTPTTDKKAK MATPQKTDGK 240
KAAVHVATPH PSKKPDAKTG NKSNQKSPAS AADGAYSCKS CNRNFKTDGA LQSHNQAKHT 300
SK
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Expressed during fertilization, while it is repressed during seed development. {ECO:0000269|PubMed:15082924}. |
| Uniprot | TISSUE SPECIFICITY: Predominantly expressed in ovaries. Accumulates predominantly in the micropylar region of the ovule's integument. {ECO:0000269|PubMed:15082924}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Mediates the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events (By similarity). {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By fertilization. {ECO:0000269|PubMed:15082924}. |
