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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
AT5G65100.1 |
Common Name | EIL5, MQN23.3 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family |
EIL |
Protein Properties |
Length: 557aa MW: 63689.6 Da PI: 4.5323 |
Description |
EIL family protein |
Gene Model |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | EIN3 | 457.1 | 1.3e-139 | 38 | 442 | 1 | 353 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.....XXXXXXX..........XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaa....tgakksn..........ksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpv 84
++lkkrmwkd++l+++lk++k+++l++ ++ t+ +++e++rrkkm+r+QD++LkYM+k+mevc+aqGfvYgi+pekgkpv
AT5G65100.1 38 DDLKKRMWKDRNLMCKLKQQKRDNLNSVISSpsssTS----AsssssssvivRRTEASRRKKMARSQDSVLKYMMKIMEVCKAQGFVYGIVPEKGKPV 131
79*********************99665554434333....24455899************************************************* PP
XXXXXXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--H CS
EIN3 85 egasdsLraWWkekvefdrngpaaisky...qaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkel 179
+g+sdsLr+WWke+v+fd+++p+a+s+y +a++li+s+es + ++s+ h+l+elqDTtlgSLLsalmqhc ppqrrfplekg++pPWWP+G+el
AT5G65100.1 132 TGSSDSLRRWWKENVQFDQTAPNAVSDYltlAAAQLISSNESLD---PNSYIHMLHELQDTTLGSLLSALMQHCVPPQRRFPLEKGLAPPWWPNGTEL 226
******************************999****9988877...99************************************************* PP
HHHHHT.--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX.XX..XXXXXXXX CS
EIN3 180 wwgelg.lskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah.ss..slrkqspk 273
wwge+g ++ ++g+ppy+kphdl+kawkvsvL+avikhmsp++e++r+l+rqsk+lqdkm+ake++++++vlnqee+ +++++ + + +++ +
AT5G65100.1 227 WWGEQGaAAFEHGPPPYRKPHDLRKAWKVSVLAAVIKHMSPNLERVRRLARQSKCLQDKMMAKETDTWSRVLNQEEARLNRLKISdDEdeDRDQEQAR 324
******9999999********************************************************************99995333232234445 PP
XXXXXXXXXXXX.....XXXXXX.XXXXXXXXXX....................................XXXXXXXXXXXXXXXXXXXXX......X CS
EIN3 274 vtlsceqkedve.....gkkeskikhvqavktta....................................gfpvvrkrkkkpsesakvsskevsrtcq 330
+t+ +++ ++ +++e+ +++++k+ + ++p+ +krk +++e++++ s+ ++tcq
AT5G65100.1 325 FTCFDQEPSLNTcfivgQDQEPL-GSMRKDKRVDqefssndcflvaqdqeprkgkkadqewspnscflvdQEPLGNKRKGEFVEKEAMLSN--VYTCQ 419
5555554444449***5555555.78999999889******************************************************99..7**** PP
XXXXXX.XXXXXXXXXXXXXXXX CS
EIN3 331 ssqfrgsetelifadknsisqne 353
+s++++s+++l+f dkn ++ +e
AT5G65100.1 420 NSSCPSSDVSLGFVDKNLRTGHE 442
********************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009873 | Biological Process | ethylene-activated signaling pathway |
GO:0071281 | Biological Process | cellular response to iron ion |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 557 aa
Download sequence Send
to blast |
MVEVQDLEPL SPIQDYDEDD LEEDVDEFER FGEEISYDDL KKRMWKDRNL MCKLKQQKRD 60 NLNSVISSPS SSTSASSSSS SSVIVRRTEA SRRKKMARSQ DSVLKYMMKI MEVCKAQGFV 120 YGIVPEKGKP VTGSSDSLRR WWKENVQFDQ TAPNAVSDYL TLAAAQLISS NESLDPNSYI 180 HMLHELQDTT LGSLLSALMQ HCVPPQRRFP LEKGLAPPWW PNGTELWWGE QGAAAFEHGP 240 PPYRKPHDLR KAWKVSVLAA VIKHMSPNLE RVRRLARQSK CLQDKMMAKE TDTWSRVLNQ 300 EEARLNRLKI SDDEDEDRDQ EQARFTCFDQ EPSLNTCFIV GQDQEPLGSM RKDKRVDQEF 360 SSNDCFLVAQ DQEPRKGKKA DQEWSPNSCF LVDQEPLGNK RKGEFVEKEA MLSNVYTCQN 420 SSCPSSDVSL GFVDKNLRTG HEIECLYGTP ELVNQSSGGG SDGFVRSITT SDDDYSASSK 480 AEDTRDYHNQ DGNWLDYLWF ERLHDLNFSD QGFEDQTSTV DLNQLPDHSD SNQTMNEDDI 540 SLWDMGCEDK DIYMSQD
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Functional Description ? help
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Source |
Description |
UniProt | Putative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AB013395 | 0.0 | AB013395.1 Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQN23. |
GenBank | CP002688 | 0.0 | CP002688.1 Arabidopsis thaliana chromosome 5 sequence. |
Publications
? help Back to Top |
- Riechmann JL, et al.
Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Science, 2000. 290(5499): p. 2105-10 [PMID:11118137] - Rieu I,Mariani C,Weterings K
Expression analysis of five tobacco EIN3 family members in relation to tissue-specific ethylene responses. J. Exp. Bot., 2003. 54(391): p. 2239-44 [PMID:12909687] - Jiao Y, et al.
A genome-wide analysis of blue-light regulation of Arabidopsis transcription factor gene expression during seedling development. Plant Physiol., 2003. 133(4): p. 1480-93 [PMID:14605227] - Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] - Binder BM, et al.
The Arabidopsis EIN3 binding F-Box proteins EBF1 and EBF2 have distinct but overlapping roles in ethylene signaling. Plant Cell, 2007. 19(2): p. 509-23 [PMID:17307926]
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