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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
AT5G59570.1 |
| Common Name | BOA, F2O15.230, PCLL |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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| Family |
G2-like |
| Protein Properties |
Length: 298aa MW: 32366.9 Da PI: 4.6058 |
| Description |
G2-like family protein |
| Gene Model |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 95.4 | 4.4e-30 | 141 | 194 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
+prl+Wtp+LH+rFv++v++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
AT5G59570.1 141 RPRLVWTPQLHKRFVDVVAHL-GIKNAVPKTIMQLMNVEGLTRENVASHLQKYRL 194
59*******************.********************************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0007623 | Biological Process | circadian rhythm |
| GO:0009909 | Biological Process | regulation of flower development |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 298 aa
Download sequence Send
to blast |
MGKEVMVSDY GDDDGEDAGG GDEYRIPEWE IGLPNGDDLT PLSQYLVPSI LALAFSMIPE 60
RSRTIHDVNR ASQITLSSLR SSTNASSVME EVVDRVESSV PGSDPKKQKK SDGGEAAAVE 120
DSTAEEGDSG PEDASGKTSK RPRLVWTPQL HKRFVDVVAH LGIKNAVPKT IMQLMNVEGL 180
TRENVASHLQ KYRLYLKRIQ GLTTEEDPYS SSDQLFSSTP VPPQSFQDGG GSNGKLGVPV 240
PVPSMVPIPG YGNQMGMQGY YQQYSNHGNE SNQYMMQQNK FGTMVTYPSV GGGDVNDK
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that is a critical component of the regulatory circuit of the circadian clock. Binds to specific sites on CCA1 promoter leading to CCA1 activation. Is required for the rhythmic expression of other clock genes such as LHY, GI and APRR1/TOC1. {ECO:0000269|PubMed:21447790}. |
| Function -- GeneRIF ? help
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- BOA is rhythmically expressed in Arabidopsis and affects flowering time.
[PMID: 21447790]
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| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AB025604 | 0.0 | AB025604.1 Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F2O15. |
| GenBank | AB206577 | 0.0 | AB206577.1 Arabidopsis thaliana PCLL gene for putative transcription factor, complete cds. |
| GenBank | AK117348 | 0.0 | AK117348.1 Arabidopsis thaliana At5g59570 mRNA for ARR1 like protein, complete cds, clone: RAFL16-91-G07. |
| GenBank | BT026065 | 0.0 | BT026065.1 Arabidopsis thaliana At5g59570 mRNA, complete cds. |
| GenBank | CP002688 | 0.0 | CP002688.1 Arabidopsis thaliana chromosome 5 sequence. |
| Publications
? help Back to Top |
- Riechmann JL, et al.
Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.
Science, 2000. 290(5499): p. 2105-10
[PMID:11118137] - Seki M, et al.
Functional annotation of a full-length Arabidopsis cDNA collection.
Science, 2002. 296(5565): p. 141-5
[PMID:11910074] - Hazen SP, et al.
LUX ARRHYTHMO encodes a Myb domain protein essential for circadian rhythms.
Proc. Natl. Acad. Sci. U.S.A., 2005. 102(29): p. 10387-92
[PMID:16006522] - Onai K,Ishiura M
PHYTOCLOCK 1 encoding a novel GARP protein essential for the Arabidopsis circadian clock.
Genes Cells, 2005. 10(10): p. 963-72
[PMID:16164597] - Dai S, et al.
BROTHER OF LUX ARRHYTHMO is a component of the Arabidopsis circadian clock.
Plant Cell, 2011. 23(3): p. 961-72
[PMID:21447790] - Nemoto K, et al.
Autophosphorylation profiling of Arabidopsis protein kinases using the cell-free system.
Phytochemistry, 2011. 72(10): p. 1136-44
[PMID:21477822] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Jin J, et al.
An Arabidopsis Transcriptional Regulatory Map Reveals Distinct Functional and Evolutionary Features of Novel Transcription Factors.
Mol. Biol. Evol., 2015. 32(7): p. 1767-73
[PMID:25750178] - Huang H, et al.
Identification of Evening Complex Associated Proteins in Arabidopsis by Affinity Purification and Mass Spectrometry.
Mol. Cell Proteomics, 2016. 15(1): p. 201-17
[PMID:26545401]
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