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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
AT5G50080.1 |
| Common Name | ERF110, MPF21.9 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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| Family |
ERF |
| Protein Properties |
Length: 220aa MW: 24257 Da PI: 9.4484 |
| Description |
ethylene response factor 110 |
| Gene Model |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 65.9 | 7.9e-21 | 76 | 126 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56
+y+GVr+++ +g+W+AeIrdp + +r++lg+f+tae Aa+a+++a+++++g+
AT5G50080.1 76 RYRGVRQRP-WGKWAAEIRDP-----HraARVWLGTFDTAEAAARAYDEAALRFRGN 126
7********.**********7.....338*************************985 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009873 | Biological Process | ethylene-activated signaling pathway |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0048510 | Biological Process | regulation of timing of transition from vegetative to reproductive phase |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 220 aa
Download sequence Send
to blast |
MSAMVSALTQ VVSARSQTEA EGAHSSSSSA GHKRGWLGID SAPIPSSFAR VDSSHNPIEE 60
SMSKAFPEEA REKKRRYRGV RQRPWGKWAA EIRDPHRAAR VWLGTFDTAE AAARAYDEAA 120
LRFRGNKAKL NFPEDVRILP PPPPLLRSPA DTVANKAEED LINYWSYTKL LQSSGQRSFL 180
ERGQEESSNI FEHSPMEQPL PPSSSGPSSS NFPAPSLPNT
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| Functional Description ? help
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| Source |
Description |
| TAIR | encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
| Function -- GeneRIF ? help
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- Data indicate the biological role of the Ser-62-phosphorylated isoform of ethylene-responsive transcription factor ERF110 in transgenic plants.
[PMID: 22442259] - Data indicate that the expression and phosphorylation of ERF110 were regulated by ethylene via both Ethylene-Insensitive2-dependent and -independent pathways, which constitute a dual-and-opposing mechanism for ethylene in the regulation of bolting.
[PMID: 23188807]
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| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AJ580378 | 0.0 | AJ580378.1 Arabidopsis thaliana mRNA for putative AP2 domain transcription factor, clone At5g5008-like. |
| Publications
? help Back to Top |
- Riechmann JL, et al.
Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.
Science, 2000. 290(5499): p. 2105-10
[PMID:11118137] - Gong W, et al.
Genome-wide ORFeome cloning and analysis of Arabidopsis transcription factor genes.
Plant Physiol., 2004. 135(2): p. 773-82
[PMID:15208423] - Nakano T,Suzuki K,Fujimura T,Shinshi H
Genome-wide analysis of the ERF gene family in Arabidopsis and rice.
Plant Physiol., 2006. 140(2): p. 411-32
[PMID:16407444] - Li Y, et al.
Absolute quantitation of isoforms of post-translationally modified proteins in transgenic organism.
Mol. Cell Proteomics, 2012. 11(8): p. 272-85
[PMID:22442259] - Zhu L,Liu D,Li Y,Li N
Functional phosphoproteomic analysis reveals that a serine-62-phosphorylated isoform of ethylene response factor110 is involved in Arabidopsis bolting.
Plant Physiol., 2013. 161(2): p. 904-17
[PMID:23188807]
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