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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
AT5G39750.1 |
| Common Name | AGL81, EMB3008 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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| Family |
M-type_MADS |
| Protein Properties |
Length: 355aa MW: 40177.9 Da PI: 5.9943 |
| Description |
AGAMOUS-like 81 |
| Gene Model |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | SRF-TF | 80.2 | 1.4e-25 | 17 | 65 | 2 | 50 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
+++++s +++++s+R+++i+KKA+EL++LCd+e++vi+++++g+l++++
AT5G39750.1 17 SSSSYSLASTSLSNRLETIFKKASELCTLCDIEACVIYYGPDGELKTWP 65
799*********************************************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009793 | Biological Process | embryo development ending in seed dormancy |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 355 aa
Download sequence Send
to blast |
MAIRSLPSSS RCSSSSSSSS YSLASTSLSN RLETIFKKAS ELCTLCDIEA CVIYYGPDGE 60
LKTWPPEREK VEDIALRYSQ LNEALRRKKS VTLYDFLNKK KDKTNLEKKA KITDNDDLKT 120
CLKNVNILKY PLADHYSPDQ VSQLIQSLEP HVSKVRERIR FVESQKHKET KPDHQSLASS 180
SLNHQTQSLN PSQFSLFMYN HGDNTLSQIP VSASNFNQDY FSALLEQSEL KSQIMKQDLC 240
GYEQNMCMSN HGDATLSQIP LSASNLNQDF SALLQDESGL MQQELCGYDQ NMFMNNNNFQ 300
HSFVSNTQDH SAPVVQESVN NNYGLMPHVP CGYDQNLFTS DITNNNLLIN NSMFL
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction. {ECO:0000305|PubMed:26462908}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AB016876 | 0.0 | AB016876.1 Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MKM21. |
| GenBank | AY141225 | 0.0 | AY141225.1 Arabidopsis thaliana MADS-box protein AGL81 mRNA, complete cds. |
| GenBank | CP002688 | 0.0 | CP002688.1 Arabidopsis thaliana chromosome 5 sequence. |
| Publications
? help Back to Top |
- De Bodt S, et al.
Genomewide structural annotation and evolutionary analysis of the type I MADS-box genes in plants.
J. Mol. Evol., 2003. 56(5): p. 573-86
[PMID:12698294] - Parenicová L, et al.
Molecular and phylogenetic analyses of the complete MADS-box transcription factor family in Arabidopsis: new openings to the MADS world.
Plant Cell, 2003. 15(7): p. 1538-51
[PMID:12837945] - Kofuji R, et al.
Evolution and divergence of the MADS-box gene family based on genome-wide expression analyses.
Mol. Biol. Evol., 2003. 20(12): p. 1963-77
[PMID:12949148] - Dal Bosco C, et al.
Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana.
J. Biol. Chem., 2004. 279(2): p. 1060-9
[PMID:14576160] - de Folter S, et al.
Comprehensive interaction map of the Arabidopsis MADS Box transcription factors.
Plant Cell, 2005. 17(5): p. 1424-33
[PMID:15805477] - Bemer M,Heijmans K,Airoldi C,Davies B,Angenent GC
An atlas of type I MADS box gene expression during female gametophyte and seed development in Arabidopsis.
Plant Physiol., 2010. 154(1): p. 287-300
[PMID:20631316] - Li HJ, et al.
Arabidopsis CBP1 Is a Novel Regulator of Transcription Initiation in Central Cell-Mediated Pollen Tube Guidance.
Plant Cell, 2015. 27(10): p. 2880-93
[PMID:26462908] - Zhang S, et al.
FERTILIZATION-INDEPENDENT SEED-Polycomb Repressive Complex 2 Plays a Dual Role in Regulating Type I MADS-Box Genes in Early Endosperm Development.
Plant Physiol., 2018. 177(1): p. 285-299
[PMID:29523711]
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