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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
AT5G37415.1 |
| Common Name | AGL105 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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| Family |
M-type_MADS |
| Protein Properties |
Length: 316aa MW: 37288.5 Da PI: 8.7363 |
| Description |
AGAMOUS-like 105 |
| Gene Model |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | SRF-TF | 40.2 | 4.5e-13 | 85 | 111 | 25 | 51 |
HHHHHHHT-EEEEEEE-TTSEEEEEE- CS
SRF-TF 25 eELSvLCdaevaviifsstgklyeyss 51
+EL++LCd+e++vi+++++g+l+++++
AT5G37415.1 85 SELCILCDIEACVIYYGPDGELKTWPK 111
7************************96 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 316 aa
Download sequence Send
to blast |
MRDPDIVQNT RSLILLRVLT HEKLIQSHRY FFVGWIHKNL SRFRRKIRRR FLHCDFSGFG 60
FFPRRFLFGF VLEKMDHLQE SFRGSELCIL CDIEACVIYY GPDGELKTWP KEREKVEDIA 120
LRYSQLNEAL RRKKSVTLYD FLNKKKDKTN LEKKAMITDN DDLKTCLKNV NVLKSPIADH 180
YFNDQISQLI QSLEPHVSKV QERIRFVESQ KHKETKLDHQ SLASIYSLNQ SLNPSQFTLF 240
LYNHGDNTMS QIPNMFMNNN NFQHSFVSNT QDYSALQESV NNNYGLMPNV LCGYDQNLFT 300
SDITNNNLLI DNSMYL
|
| Functional Description ? help
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| Source |
Description |
| TAIR | Encodes a MADS-box gene AGL105 (AGAMOUS-LIKE 105). Note that previous reports (Plant Cell 2003,15:1538; PNAS 2003, 100:13407) have incorrectly named AT5G37420 as AGL105. Current nomenclature is based on Plant Cell 2003, 15:1538 where the GenBank accession number given for AGL105 is AY141227 (Supplemental Table 3), which corresponds to AT5G37415. |
| UniProt | Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction. {ECO:0000305|PubMed:26462908}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP000607 | 0.0 | AP000607.2 Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:T25O11. |
| GenBank | CP002688 | 0.0 | CP002688.1 Arabidopsis thaliana chromosome 5 sequence. |
