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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
AT5G17810.2 |
| Common Name | MVA3.160, MVA3.17, WOX12 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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| Family |
WOX |
| Protein Properties |
Length: 268aa MW: 29713.9 Da PI: 6.5705 |
| Description |
WUSCHEL related homeobox 12 |
| Gene Model |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 49.3 | 8.2e-16 | 19 | 79 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
r R+++++eq+ +Le+ F++ + +p ++e ++ k l + +++V++WFqNrR + ++
AT5G17810.2 19 RARWSPKPEQILILESIFNSgTVNPPKDETVRIRKMLekfgAVGDANVFYWFQNRRSRSRR 79
78*****************99*************************************997 PP
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| 2 | Wus_type_Homeobox | 105.3 | 4e-34 | 18 | 81 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
+r+RW+P+peQi iLe++++sG+++P+k+e+ ri+++Le++G+++d+NVfyWFQNr++R+r+++
AT5G17810.2 18 VRARWSPKPEQILILESIFNSGTVNPPKDETVRIRKMLEKFGAVGDANVFYWFQNRRSRSRRRH 81
589**********************************************************985 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0048830 | Biological Process | adventitious root development |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 268 aa
Download sequence Send
to blast |
MNQEGASHSP SSTSTEPVRA RWSPKPEQIL ILESIFNSGT VNPPKDETVR IRKMLEKFGA 60
VGDANVFYWF QNRRSRSRRR HRQLLAATTA AATSIGAEDH QHMTAMSMHQ YPCSNNEIDL 120
GFGSCSNLSA NYFLNGSSSS QIPSFFLGLS SSSGGCENNN GMENLFKMYG HESDHNHQQQ 180
HHSSNAASVL NPSDQNSNSQ YEQEGFMTVF INGVPMEVTK GAIDMKTMFG DDSVLLHSSG 240
LPLPTDEFGF LMHSLQHGQT YFLVPRQT
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| Functional Description ? help
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| Source |
Description |
| TAIR | Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box. |
| UniProt | Transcription factor which may be involved in developmental processes. {ECO:0000250}. |
| Function -- GeneRIF ? help
Back to Top |
- WOX11 directly responds to a wounding-induced auxin maximum in and surrounding the procambium and acts redundantly with its homolog WOX12 to upregulate LATERAL ORGAN BOUNDARIES DOMAIN16 (LBD16) and LBD29
[PMID: 24642937] - the expression switch from WOX11/12 to WOX5/7 is critical for initiation of the root primordium during de novo root organogenesis.
[PMID: 27784768]
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| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AY251403 | 0.0 | AY251403.1 Arabidopsis thaliana WOX12 protein mRNA, complete cds. |
| Publications
? help Back to Top |
- Riechmann JL, et al.
Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.
Science, 2000. 290(5499): p. 2105-10
[PMID:11118137] - Seki M, et al.
Functional annotation of a full-length Arabidopsis cDNA collection.
Science, 2002. 296(5565): p. 141-5
[PMID:11910074] - R
Rapid identification of Arabidopsis insertion mutants by non-radioactive detection of T-DNA tagged genes.
Plant J., 2002. 32(2): p. 243-53
[PMID:12383089] - Yamada K, et al.
Empirical analysis of transcriptional activity in the Arabidopsis genome.
Science, 2003. 302(5646): p. 842-6
[PMID:14593172] - Haecker A, et al.
Expression dynamics of WOX genes mark cell fate decisions during early embryonic patterning in Arabidopsis thaliana.
Development, 2004. 131(3): p. 657-68
[PMID:14711878] - Wu X,Chory J,Weigel D
Combinations of WOX activities regulate tissue proliferation during Arabidopsis embryonic development.
Dev. Biol., 2007. 309(2): p. 306-16
[PMID:17706632] - Hirakawa Y,Kondo Y,Fukuda H
TDIF peptide signaling regulates vascular stem cell proliferation via the WOX4 homeobox gene in Arabidopsis.
Plant Cell, 2010. 22(8): p. 2618-29
[PMID:20729381] - Zhang X,Zong J,Liu J,Yin J,Zhang D
Genome-wide analysis of WOX gene family in rice, sorghum, maize, Arabidopsis and poplar.
J Integr Plant Biol, 2010. 52(11): p. 1016-26
[PMID:20977659] - Arabidopsis Interactome Mapping Consortium
Evidence for network evolution in an Arabidopsis interactome map.
Science, 2011. 333(6042): p. 601-7
[PMID:21798944] - Liu J, et al.
WOX11 and 12 are involved in the first-step cell fate transition during de novo root organogenesis in Arabidopsis.
Plant Cell, 2014. 26(3): p. 1081-93
[PMID:24642937] - Hu X,Xu L
Transcription Factors WOX11/12 Directly Activate WOX5/7 to Promote Root Primordia Initiation and Organogenesis.
Plant Physiol., 2016. 172(4): p. 2363-2373
[PMID:27784768]
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