PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AT5G06839.3
Common NamebZIP65, TGA10
Organism
Arabidopsis thaliana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Family bZIP
Protein Properties Length: 460aa    MW: 51166.6 Da    PI: 7.2074
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AT5G06839.3genomeTAIRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.31.1e-10161189533
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee 33 
                  k  rr+++NReAAr+sR+RKka++++Le 
  AT5G06839.3 161 KTLRRLAQNREAARKSRLRKKAYVQQLES 189
                  7789***********************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.8E-9152205No hitNo description
SMARTSM003385.0E-7157245IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.737159203IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.01E-7161202No hitNo description
CDDcd147081.25E-22161213No hitNo description
PfamPF001709.6E-8161191IPR004827Basic-leucine zipper domain
PROSITE patternPS000360164179IPR004827Basic-leucine zipper domain
PfamPF141445.0E-31254328IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0009005anatomyroot
PO:0009010anatomyseed
PO:0009046anatomyflower
PO:0025022anatomycollective leaf structure
PO:0001078developmental stageplant embryo cotyledonary stage
PO:0007611developmental stagepetal differentiation and expansion stage
PO:0007616developmental stageflowering stage
Sequence ? help Back to Top
Protein Sequence    Length: 460 aa     Download sequence    Send to blast
MQGHHQNHHQ HLSSSSATSS HGNFMNKDGY DIGEIDPSLF LYLDGQGHHD PPSTAPSPLH  60
HHHTTQNLAM RPPTSTLNIF PSQPMHIEPP PSSTHNTDNT RLVPAAQPSG STRPASDPSM  120
DLTNHSQFHQ PPQGSKSIKK EGNRKGLASS DHDIPKSSDP KTLRRLAQNR EAARKSRLRK  180
KAYVQQLESC RIKLTQLEQE IQRARSQGVF FGGSLIGGDQ QQGGLPIGPG NISSEAAVFD  240
MEYARWLEEQ QRLLNELRVA TQEHLSENEL RMFVDTCLAH YDHLINLKAM VAKTDVFHLI  300
SGAWKTPAER CFLWMGGFRP SEIIKVIVNQ IEPLTEQQIV GICGLQQSTQ EAEEALSQGL  360
EALNQSLSDS IVSDSLPPAS APLPPHLSNF MSHMSLALNK LSALEGFVLQ ADNLRHQTIH  420
RLNQLLTTRQ EARCLLAVAE YFHRLQALSS LWLARPRQDG
Expression -- Microarray ? help Back to Top
Source ID E-value
Genevisible250701_at0.0
Expression AtlasAT5G06839-
AtGenExpressAT5G06839-
ATTED-IIAT5G06839-
Expression -- Description ? help Back to Top
Source Description
UniprotDEVELOPMENTAL STAGE: During anther development, accumulates in anther primordia during archesporial cell specification and later present in a horseshoe pattern associated with the lateral and adaxial portion of primordia, prior to the emergence of distinct locules. Expressed throughout sporogenic tissue and surrounding cells layers in adaxial and adaxial locules. Localized to the tapetum and middle layers, gradually fading postmeiosis with degeneration of these cell layers. {ECO:0000269|PubMed:20805327}.
UniprotTISSUE SPECIFICITY: Expressed at low levels in inflorescence apex and flowers. {ECO:0000269|PubMed:20805327}.
Functional Description ? help Back to Top
Source Description
UniProtTogether with TGA9, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}.
Function -- GeneRIF ? help Back to Top
  1. Mutations in TGA9 and TGA10 lead to male sterility and differential defects in abaxial and adaxial anther lobe development similar to roxy1 roxy2 mutants. [TGA10]
    [PMID: 20805327]
  2. TGA10 is involved in reactive oxygen species mediated signaling during pathogen-associated molecular pattern responses.
    [PMID: 27717447]
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAP27203113Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAT5G06839.3
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Strongly induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Interaction ? help Back to Top
Source Intact With
BioGRIDAT1G14920
Phenotype -- Mutation ? help Back to Top
Source ID
T-DNA ExpressAT5G06839
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ1327420.0HQ132742.1 Arabidopsis thaliana bZIP65 (At5g06839) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001190244.10.0bZIP transcription factor family protein
SwissprotE3VNM40.0TGA10_ARATH; Transcription factor TGA10
TrEMBLA0A1J3I3I60.0A0A1J3I3I6_NOCCA; Transcription factor HBP-1b(C1)
STRINGAT5G06839.30.0(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM72072843
Representative plantOGRP75161218
Publications ? help Back to Top
  1. Jakoby M, et al.
    bZIP transcription factors in Arabidopsis.
    Trends Plant Sci., 2002. 7(3): p. 106-11
    [PMID:11906833]
  2. Hepworth SR,Zhang Y,McKim S,Li X,Haughn GW
    BLADE-ON-PETIOLE-dependent signaling controls leaf and floral patterning in Arabidopsis.
    Plant Cell, 2005. 17(5): p. 1434-48
    [PMID:15805484]
  3. Deppmann CD,Alvania RS,Taparowsky EJ
    Cross-species annotation of basic leucine zipper factor interactions: Insight into the evolution of closed interaction networks.
    Mol. Biol. Evol., 2006. 23(8): p. 1480-92
    [PMID:16731568]
  4. Murmu J, et al.
    Arabidopsis basic leucine-zipper transcription factors TGA9 and TGA10 interact with floral glutaredoxins ROXY1 and ROXY2 and are redundantly required for anther development.
    Plant Physiol., 2010. 154(3): p. 1492-504
    [PMID:20805327]
  5. Zander M,Chen S,Imkampe J,Thurow C,Gatz C
    Repression of the Arabidopsis thaliana jasmonic acid/ethylene-induced defense pathway by TGA-interacting glutaredoxins depends on their C-terminal ALWL motif.
    Mol Plant, 2012. 5(4): p. 831-40
    [PMID:22207719]
  6. Mar
    Large-scale identification of gibberellin-related transcription factors defines group VII ETHYLENE RESPONSE FACTORS as functional DELLA partners.
    Plant Physiol., 2014. 166(2): p. 1022-32
    [PMID:25118255]
  7. Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S
    Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22.
    Plant Sci., 2016. 252: p. 12-21
    [PMID:27717447]
  8. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]