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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
AT4G36620.1 |
| Common Name | C7A10.740, GATA19, HANL2 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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| Family |
GATA |
| Protein Properties |
Length: 211aa MW: 23319.3 Da PI: 7.2885 |
| Description |
GATA transcription factor 19 |
| Gene Model |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 63.9 | 1.8e-20 | 77 | 111 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++
AT4G36620.1 77 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 111
********************************986 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0030154 | Biological Process | cell differentiation |
| GO:0045944 | Biological Process | positive regulation of transcription from RNA polymerase II promoter |
| GO:0005634 | Cellular Component | nucleus |
| GO:0005667 | Cellular Component | transcription factor complex |
| GO:0000977 | Molecular Function | RNA polymerase II regulatory region sequence-specific DNA binding |
| GO:0001085 | Molecular Function | RNA polymerase II transcription factor binding |
| GO:0001228 | Molecular Function | transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding |
| GO:0003682 | Molecular Function | chromatin binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 211 aa
Download sequence Send
to blast |
MGFSMFFSPE NDVSHHSSPY ASVDCTLSLG TPSTRLCNED DERRFSSHTS DTIGWDFLNG 60
SKKGGGGGGH NLLARRCANC DTTSTPLWRN GPRGPKSLCN ACGIRFKKEE RRASTARNST 120
SGGGSTAAGV PTLDHQASAN YYYNNNNQYA SSSPWHHQHN TQRVPYYSPA NNEYSYVDDV 180
RVVDHDVTTD PFLSWRLNVA DRTGLVHDFT M
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Expressed throughout the inflorescence meristem (IM) and early stages of floral primordia. In developping flowers, restricted to the innert hree whorls, speci fi cally in the petals, stamens, and carpels. Within the stamens, mostly detected in the anther locules as well as in the vascular strands. In carpels, mainly present in ovules. {ECO:0000269|PubMed:23335616}. |
| Functional Description ? help
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| Source |
Description |
| TAIR | Encodes a member of the GATA factor family of zinc finger transcription factors. |
| UniProt | Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. Regulates both flower and shoot apical meristem (SAM) development, especially for establishing organ boundaries in shoots and flowers, probably by controlling the number and position of WUS-expressing cells (PubMed:23335616, PubMed:25077795). {ECO:0000250, ECO:0000269|PubMed:23335616, ECO:0000269|PubMed:25077795}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by HAN. {ECO:0000269|PubMed:23335616}. |
| Publications
? help Back to Top |
- Riechmann JL, et al.
Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.
Science, 2000. 290(5499): p. 2105-10
[PMID:11118137] - Jeong MJ,Jeong MJ,Shih MC
Interaction of a GATA factor with cis-acting elements involved in light regulation of nuclear genes encoding chloroplast glyceraldehyde-3-phosphate dehydrogenase in Arabidopsis.
Biochem. Biophys. Res. Commun., 2003. 300(2): p. 555-62
[PMID:12504119] - Comai L, et al.
Efficient discovery of DNA polymorphisms in natural populations by Ecotilling.
Plant J., 2004. 37(5): p. 778-86
[PMID:14871304] - Reyes JC,Muro-Pastor MI,Florencio FJ
The GATA family of transcription factors in Arabidopsis and rice.
Plant Physiol., 2004. 134(4): p. 1718-32
[PMID:15084732] - Zhao Y, et al.
HANABA TARANU is a GATA transcription factor that regulates shoot apical meristem and flower development in Arabidopsis.
Plant Cell, 2004. 16(10): p. 2586-600
[PMID:15367721] - Bi YM, et al.
Genetic analysis of Arabidopsis GATA transcription factor gene family reveals a nitrate-inducible member important for chlorophyll synthesis and glucose sensitivity.
Plant J., 2005. 44(4): p. 680-92
[PMID:16262716] - Liu PP,Koizuka N,Martin RC,Nonogaki H
The BME3 (Blue Micropylar End 3) GATA zinc finger transcription factor is a positive regulator of Arabidopsis seed germination.
Plant J., 2005. 44(6): p. 960-71
[PMID:16359389] - Manfield IW,Devlin PF,Jen CH,Westhead DR,Gilmartin PM
Conservation, convergence, and divergence of light-responsive, circadian-regulated, and tissue-specific expression patterns during evolution of the Arabidopsis GATA gene family.
Plant Physiol., 2007. 143(2): p. 941-58
[PMID:17208962] - Zhang X, et al.
Transcription repressor HANABA TARANU controls flower development by integrating the actions of multiple hormones, floral organ specification genes, and GATA3 family genes in Arabidopsis.
Plant Cell, 2013. 25(1): p. 83-101
[PMID:23335616] - Behringer C,Bastakis E,Ranftl QL,Mayer KF,Schwechheimer C
Functional diversification within the family of B-GATA transcription factors through the leucine-leucine-methionine domain.
Plant Physiol., 2014. 166(1): p. 293-305
[PMID:25077795]
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