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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
AT4G11070.2 |
| Common Name | AtWRKY41, F2P3.16, T22B4.50, WRKY41 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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| Family |
WRKY |
| Protein Properties |
Length: 281aa MW: 31499.4 Da PI: 9.4743 |
| Description |
WRKY family protein |
| Gene Model |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 91.1 | 8.7e-29 | 109 | 169 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
dD ++WrKYGqK++ g++fprsYYrCt++ C+++k+v+rs+ dp+++e+tY+g+H+++
AT4G11070.2 109 DDIFSWRKYGQKDILGAKFPRSYYRCTFRntqYCWATKQVQRSDGDPTIFEVTYRGTHTCS 169
8**************************998889**************************97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 281 aa
Download sequence Send
to blast |
MEMMNWERRS LLNELIHGLK AAKQLQAILM LNGSTTQHNP TIELAPDPLA HPGKVPGSPA 60
SITGNPRSEE FFNVRSKEFN LSSKKRKMLP KWTEQVRISP ERGLEGPHDD IFSWRKYGQK 120
DILGAKFPRS YYRCTFRNTQ YCWATKQVQR SDGDPTIFEV TYRGTHTCSQ GIPLPEKRET 180
KPKHTVAVNY QNLRASLTVR TGGLGSEAFS FPVTSPLYTY ESINGGGTFY HHVGSSGPSD 240
FTGLISTNTS TGSSPIFDVN FQFDPTAEIN TGFPTFFHNS I
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| Functional Description ? help
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| Source |
Description |
| TAIR | member of WRKY Transcription Factor; Group III |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
| Function -- GeneRIF ? help
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- WRKY41 is an important regulator of ABI3 expression, and hence of seed dormancy.
[PMID: 24946881]
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| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT001107 | 0.0 | BT001107.1 Arabidopsis thaliana clone C103116 (A) putative WRKY family transcription factor (At4g11070) mRNA, complete cds. |
| Publications
? help Back to Top |
- Eulgem T,Rushton PJ,Robatzek S,Somssich IE
The WRKY superfamily of plant transcription factors.
Trends Plant Sci., 2000. 5(5): p. 199-206
[PMID:10785665] - Riechmann JL, et al.
Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.
Science, 2000. 290(5499): p. 2105-10
[PMID:11118137] - Yamada K, et al.
Empirical analysis of transcriptional activity in the Arabidopsis genome.
Science, 2003. 302(5646): p. 842-6
[PMID:14593172] - Higashi K, et al.
Modulation of defense signal transduction by flagellin-induced WRKY41 transcription factor in Arabidopsis thaliana.
Mol. Genet. Genomics, 2008. 279(3): p. 303-12
[PMID:18219494] - Ding ZJ, et al.
WRKY41 controls Arabidopsis seed dormancy via direct regulation of ABI3 transcript levels not downstream of ABA.
Plant J., 2014. 79(5): p. 810-23
[PMID:24946881] - Duan S, et al.
Functional characterization of a heterologously expressed Brassica napus WRKY41-1 transcription factor in regulating anthocyanin biosynthesis in Arabidopsis thaliana.
Plant Sci., 2018. 268: p. 47-53
[PMID:29362083]
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