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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
AT4G00238.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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| Family |
GeBP |
| Protein Properties |
Length: 345aa MW: 38186.2 Da PI: 9.4122 |
| Description |
DNA-binding storekeeper protein-related transcriptional regulator |
| Gene Model |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF573 | 106.4 | 2.2e-33 | 139 | 229 | 2 | 98 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98
++qr+wseeDei+lLq++idfka+tg+sp+d+ d+f++++kksisf+vsk q+++Kir++K+K+ +++k s++++hd+k+++l+ ++Wgs
AT4G00238.1 139 HAQRVWSEEDEISLLQAMIDFKAETGTSPWDHKDRFFDIAKKSISFDVSKVQFFDKIRSFKRKYFGDRKV------RSVESDHDKKCLGLAVSFWGS 229
579****************************************************************999......899****************95 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0010629 | Biological Process | negative regulation of gene expression |
| GO:0071333 | Biological Process | cellular response to glucose stimulus |
| GO:0005730 | Cellular Component | nucleolus |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 345 aa
Download sequence Send
to blast |
MASLENPAID SSSEFESSSE EISSSKESKP KEAPVTVPST KTLNSPSAAV AVSDDSESEK 60
QSFVLTRRKK KEGAAESPAV KSGKKEGAAE SPAVKSGNNE GATESPAVKS GKKRASEGTT 120
SRDMHVKRIK KEGDNKKGHA QRVWSEEDEI SLLQAMIDFK AETGTSPWDH KDRFFDIAKK 180
SISFDVSKVQ FFDKIRSFKR KYFGDRKVRS VESDHDKKCL GLAVSFWGSD GVSLETPVKK 240
KVKDESVLVK ANSKEKNVKP LVKEDEQVVI LGEDSEWFEE SFLVPVIASL GLDEYSVKKK 300
WSKVSVETKK RIQEKMKLVD AKKCELLLAN MDVLKEVTSV LTQTN
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed strongly in leaves and flowers, weakly in roots, and very weakly in stems. {ECO:0000269|PubMed:27031427}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription repressor that binds DNA in a sequence-specific manner, 5'-GCCT-3', to regulate the expression of PGR. Acts as a modulatory component for the glucose-triggered developmental leaf growth process. {ECO:0000269|PubMed:27031427}. |
| Function -- GeneRIF ? help
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- AtSTKL1 and AtSTKL2 function both as repressors of AtPGR transcription and as novel transcription factors in the Glc signaling pathway.[AtSTKL1]
[PMID: 27031427]
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| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated upon glucose treatment. {ECO:0000269|PubMed:27031427}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK118935 | 0.0 | AK118935.1 Arabidopsis thaliana At4g00238 mRNA for unknown protein, complete cds, clone: RAFL21-27-G01. |
| GenBank | AL161471 | 0.0 | AL161471.2 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 1. |
| GenBank | AY084536 | 0.0 | AY084536.1 Arabidopsis thaliana clone 11106 mRNA, complete sequence. |
| GenBank | BT005630 | 0.0 | BT005630.1 Arabidopsis thaliana clone U51279 unknown protein (At4g00238) mRNA, complete cds. |
| GenBank | CP002687 | 0.0 | CP002687.1 Arabidopsis thaliana chromosome 4 sequence. |
| GenBank | F5I10 | 0.0 | AF195115.1 Arabidopsis thaliana BAC F5I10. |
| GenBank | IG005I10 | 0.0 | AF013293.1 Arabidopsis thaliana BAC IG005I10. |
| Publications
? help Back to Top |
- Pendle AF, et al.
Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions.
Mol. Biol. Cell, 2005. 16(1): p. 260-9
[PMID:15496452] - Ascencio-Ib
Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection.
Plant Physiol., 2008. 148(1): p. 436-54
[PMID:18650403] - Reiland S, et al.
Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks.
Plant Physiol., 2009. 150(2): p. 889-903
[PMID:19376835] - Arabidopsis Interactome Mapping Consortium
Evidence for network evolution in an Arabidopsis interactome map.
Science, 2011. 333(6042): p. 601-7
[PMID:21798944] - Chung MS, et al.
Regulation of Arabidopsis thaliana plasma membrane glucose-responsive regulator (AtPGR) expression by A. thaliana storekeeper-like transcription factor, AtSTKL, modulates glucose response in Arabidopsis.
Plant Physiol. Biochem., 2016. 104: p. 155-64
[PMID:27031427]
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